Oncorhynchus mykiss (rainbow trout): 110537410
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Entry
110537410 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2 isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110537410
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110537410
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110537410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110537410
NCBI-ProteinID:
XP_021479105
Ensembl:
ENSOMYG00000031156
UniProt:
A0A060WY84
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Position
12:complement(30347351..30369324)
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AA seq
319 aa
AA seq
DB search
MSHPSSAGGGGGGLGAGKAGGGKHGGSGGAAAAAAAVAAAGVGAVAGSVSALPAAVVSLP
SAALPGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSIR
NLAMEKVASTLPFPCKYASAGCLLSLHHSEKPEHEEVCEYRPYTCPCPGASCKWQGSLEA
VMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGHQ
QFFAVVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSI
AHLFADNGNLGINVTISMC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccgtcctctgcgggcggcgggggcggaggacttggtgccgggaaagctgga
ggaggaaagcacggaggttcgggaggagctgcggccgccgctgctgcagtcgccgccgcc
ggagtaggagctgtggccgggtctgtctcggctctacctgccgctgttgtttccttgccc
tcagcagcactacctggacaatctgctgaacttacagccttgtttgagtgcccggtttgt
tttgactacgttctgccaccgattctgcaatgccaggccgggcatctagtttgcaaccaa
tgtcgtcaaaagctgagttgttgtccaacttgtcgaggccctcttaccccgagtatcagg
aacttggctatggaaaaagttgcctctactctaccgtttccttgtaagtacgcatcagcc
ggctgcctgttgtccctccaccacagtgagaagcctgaacacgaggaagtgtgtgagtac
cgtccctacacctgcccgtgccccggagcttcctgtaagtggcagggctccctggaggct
gtcatgccccacctgatgcatgcccacaagtccatcaccaccctacagggagaggacatc
gtcttcctggccacagacatcaacctgccgggggctgtggactgggtcatgatgcagtcc
tgcttcggccaccactttatgctggtcctggagaagcaggagaagtacgagggccaccag
cagttctttgccgtggtgctgctcatcggaacgaggaagcaggccgagaacttcgcctac
cgcctggagctcaacgggaaccggcggcgcctcacctgggaggccacgccccgctccatc
cacgacggcgtggcggccgccatcatgaacagcgactgtctggtgtttgacacgtccatt
gctcacctgtttgctgacaacggcaacctggggatcaacgtcaccatctctatgtgctga
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