Oncorhynchus mykiss (rainbow trout): 110538240
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Entry
110538240 CDS
T07259
Name
(RefSeq) integrator complex subunit 1 isoform X1
KO
K13138
integrator complex subunit 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110538240
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
110538240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS1_INTS2-bd
INTS1_RP2B-bd
INT1_R3
INTS1_R4
Cnd3
UNC45-central
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
110538240
NCBI-ProteinID:
XP_021480610
Ensembl:
ENSOMYG00000013856
LinkDB
All DBs
Position
12:71989879..72010860
Genome browser
AA seq
2206 aa
AA seq
DB search
MNRPKPTTIRRPSAAKPSGHPPPGDFIALGSKSGGESKAPAVLLKPASTLPTDRKRETSS
SLPSSSGLSGLVKRPKISSTPPVSALGRLADVAAVDKRAISPSIKEPSVVPIEVPPAVLL
DEIENAEQDGNDDRIEGVLCGAVKQLKMNRAKPDITLYLSLMFLAKIKPNLFATEGIIEA
LCSLLRRDASINFKAKGNSLVSVLACNLLMAAYEEDENWPEIFVKVYIEDSLGERIWVDS
SHCKNFVDNIQTAFSTKMPPKSMLLQLQTDTGRSGGDISAGSSPHPSTPDEDDSQTELLI
AEEKLSPEDDGQVMPRYEELSESVEDYVLDVLKDQLNRRQPMDNVSRNLLRLLTATCGYK
EVRLMAVQRLEMWLQNPKLTRPAQDLLMSLCMNCNSHGADDMEVISNLIKIRLKPKVILN
HYMLCVRELLNAHKDNLGTMVKLVIFNELSNARNPNNMQVLHTLLQHSPEQAPKFLAMVF
QDLLTNKDDYLRASRALLREIIKQTKHEINFQSFCLGLMQERKEATYVDMEFKERFVIQV
TDLLTCSMMLGITAQVKEAGVAWDKGEKKNLDGLRSFQNNIAAIQRDAVWWLHTVVPTIA
KVPSKDYIHCLHKVLFTEQPETYYKWDNWPPESDRNFFLRLCSEVPLLEDTLMRILVIGL
SRDLPLGPADAMELADHLVKRAAGVQSDGTTSATAMDLDVLRVERIQLIDAVLNLCTYHH
PENIQLPAGYTPPNLAIATLYWKAWLLLLVVAAFNPQQIGLAAWDGYPTLKMLMEMVMTN
NYSYPPCTVADEETKTEMINRELQVSQREKQEILAFESHLAAASTKQTITESNSLLLSQL
TSLDPQGPPRKPPPAVQEQVKSLNQSLRLGHLLCRSRNPDFLLNIIQRQASSQSMPWLAD
LVQSSEGSLDVLPVQCLCEFLLHDAADDNLPIEDDEEGESKEQRAKKRQRQQKQRQLLGR
LQDLLLGPKADEQTTCEVLDYFLRRLSSSQVASRVLAMKGLSLVLTEGGLKDGEERDQPM
EEDSRDAELLPGYEWLLQDLPKLPLFDSVRGMTSTALQQAIHMETDPQTISAYLIYLSQH
APVEEQASHNDLALDVARLIVERSTIMNSLFSKYSCRPESDAVLSALISIFSSYIRRMRK
TKEGEDLYSWSESQDQVFLRWTTGETATMHILVVHAMVILLTLGPPKEESDFFNLLDIWF
PDKKPLPTAFLVDTSEEALLLPDWLKLRMIRSEVSRLVDAALQDLEPQQLLLFVQSFGIP
VSSMSKLLQYLDQAVSHDSQTLEQNIMDKNYMAHLVEVQHERGATGGHTFHGLLSSSLPP
RRDSTEVNRAKVTVETPSGSLKMRANQIPVIGPEDDLTGMLLQMFPLKVDHRRPSPPTRP
LSLALQQALAQELVRARQGGHPQQDGVSVRLLQALAALLSSAHAGALVMAMNRSHALSCP
MLRQLHLYQRLVLQDVAFSSLFFKAVMEMMTWLENPAVEAGPLRALLKSFAGQYSQKHRL
TDVRTGFLHLAEALAYQRDSEVAVRAIIATLKAGERCNAEPELIGKVLQGLVEGKSPYLE
ELLALLMTIGTETGTGSTTAGPVAMVIALLLQETEEQAVKMEVDTNNSSSEVTKTGSSSG
LLVDWLGLLDPEVTSVCPDLQRKLLFALNKGKGTPSYRPYLLALLTHQSNWTTLHQCISA
LLSKQQDQRLDPSSALDFLWACSHIPRIWQGRDQKTPQKQTDTFVLRLNPEELISLVDLI
MSESELNSRGDSSPPANAPDKAKSTLDQTSCSLIQSRLPLLHSCCHGDLVRVKKVSEYLI
NCTKKWGDSVMSKRCQNLLLQLYLHFPEVIQHVTLPDATLSSEGAADGTTCKHDVLVHRL
VTLLGDTGDTKSAENRMSDANLACRKLAVSHPVLLLRHLPMIGALLHGRIHLNFQEFRSQ
NHLTFFSNVLAILELLQPLVFHNEHQRALQDCLLSFMKILQNLRRPRMHPLAVFSKYVQF
IQKYITHDAATAIPYLQKHSDILQGLSAEHPDVLLKSLLAGLTLPVKTGSSDSSAEDRDD
ESSSGSLPMVSISASVPLTAADMTKYLKKISRGEAIEDVLEVLTEVEDKSKRNPEIIQYF
TNDLQRLMTSTEELCRNMAFSLALRCIQNNPCTAADFLPTFMYCMGSGNFDVVQTALRNL
PEYVLLCQEHADILLHKAFLVGIYGQIDTSSMISESMKVLHMEATT
NT seq
6621 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcccaagcctacaacgatcaggcggcctagtgcagcaaagccctcagggcac
cctcctcctggagatttcatagcattggggtcaaagagtggcggagagtccaaagcacct
gcagttctccttaagccagcgtccaccttacccactgaccgtaaacgagagacttcctcg
tcacttccatcctcctctggcctatccggcctcgtgaagcgccccaagatctcctctacc
cctcctgtcagcgccctaggacgactggctgatgtggcagcagtggacaaaagggctata
tcgccttcgatcaaggagccctcagtggtgcccatagaagtccccccagcagtgctcctg
gatgagattgagaatgcagagcaggatggaaatgatgatcgcattgaaggggtgctctgt
ggagctgtcaaacagctgaagatgaaccgggctaaacctgacataacactatacctcagc
ctcatgttcctggccaagattaagcccaatctcttcgccactgaaggcattattgaggcc
ttgtgtagtctccttcgccgggatgcctccatcaacttcaaagcaaagggcaacagtctg
gtgtctgtgctagcctgcaacctgctgatggcagcctatgaggaggatgagaactggcca
gagatctttgtcaaagtgtacattgaggactctttaggggagcgaatttgggtagacagt
tcccattgtaagaattttgtggacaatatccagactgccttcagtaccaaaatgccccca
aagagtatgctgctgcagttgcagactgacactggccgctccggtggagatatcagtgca
gggagcagtcctcacccctccaccccagatgaggatgacagccagactgaattgctgatt
gctgaggagaaacttagtcctgaagatgatggacaagttatgccaaggtacgaggagctg
tctgagagtgtggaggactatgttctagatgtcctgaaggaccagttgaaccgcaggcag
cccatggacaatgtgtcccgtaacctgctgcgtctgctcactgccacctgtggctacaag
gaggtgcggcttatggctgtgcagaggctagagatgtggctgcagaatccaaagctgacc
cgtccagctcaggaccttctcatgtctctctgtatgaactgcaactcccatggagcggac
gacatggaggtgatctccaacctcatcaagatccgtctgaaacctaaagtcatcctcaat
cactacatgctctgtgtcagggagctactgaatgcacacaaagacaacctgggaactatg
gtgaagctggtgatcttcaacgagctgtccaatgccaggaaccccaacaacatgcaagtc
cttcacacactgctccagcacagcccagagcaggcccctaagttcctggccatggtgttc
caggacctgctgaccaataaggatgattacctgcgtgcctctcgagccttgctgagagag
atcatcaaacagaccaagcacgagatcaacttccagtccttctgcctgggtctgatgcag
gaaaggaaggaggccacctacgtcgacatggagttcaaagaacgctttgtgatccaggtg
acagacctgctcacgtgctccatgatgctgggcatcacagctcaggtcaaggaggctggc
gttgcgtgggacaaaggagagaagaagaatctggatggtctgagatcctttcagaataat
atcgctgccattcagagggatgctgtgtggtggcttcacactgttgttcccactattgcc
aaagtgccatccaaggactacatacactgtcttcacaaggtgcttttcacagagcaacca
gagacctactacaagtgggataactggccccctgagagcgacagaaatttcttcctgcgg
ctgtgctctgaagtgccactgctggaggacactctgatgcgtatcctggtcatcggactg
tcccgtgacctgcccctgggcccggccgacgccatggagctggcggaccacctggtgaag
agggcagccggggtccagtctgatggtacaacatctgcaacagcaatggatctggatgtg
ttgagagtggagcggatccaactgattgacgcagtgctgaacctgtgcacctaccaccac
ccagagaacattcagcttcctgcgggctatactcctccgaacctggcgatagccacactc
tactggaaagcgtggctcctgctacttgtggtggccgctttcaatccacagcaaataggc
ttggctgcctgggacggctatcccacactgaaaatgctcatggagatggtcatgacaaat
aactactcctatcctccgtgtacggtggccgatgaggagaccaagaccgagatgatcaac
agggagctgcaggtgtcccagagagagaagcaggagatcctggccttcgagagccacctg
gcagctgcctccaccaagcagaccatcacagagagcaacagcctgctgctgtcccagctc
accagtctggacccacagggcccccctcgcaaacccccacccgcagtccaggagcaggtg
aagagccttaaccagtcccttcgcctgggtcacctcctctgtcgctctcgcaaccctgac
ttcctgctcaacatcatccagagacaggcctcctctcagtcaatgccctggctggctgac
ctggtgcagtccagtgaggggtccttagacgtgctgcctgtgcagtgcctgtgtgaattc
ctgcttcacgatgcagcagatgacaacttgcccatcgaggatgacgaggaaggagagagc
aaagagcagagagccaagaaaagacaaaggcaacaaaagcagcggcagctccttggacgg
ctgcaggatctgctgttgggtcctaaagctgacgaacagaccacgtgtgaggtgttggac
tacttcctgcgccgcctcagctcttctcaggtggcgtcaagagtcctggctatgaagggt
ctgtctctggtgctgactgaggggggtctgaaggatggagaggagagggaccagcccatg
gaggaggactctagagatgctgagctcctgccaggatacgagtggctcctgcaggacctc
cccaagctgcccctgttcgacagcgtccggggcatgacctccacagctctgcagcaggcc
atccacatggagacagacccacagaccatcagcgcctacctcatctacctgtcccagcat
gcaccagtggaggagcaggcgtctcacaatgacctcgctctggatgtggcccgtctgatt
gtcgagcgctccaccatcatgaacagcctgttctccaagtactcctgccggcccgagtca
gacgctgtgctctcagccctcatctccatcttctcgagctacatcaggaggatgaggaag
accaaggagggagaggacctctacagctggtcagaatctcaggaccaggtgtttctgcgt
tggaccacaggggagacagccaccatgcacattctggtggtccatgccatggtcattctc
ctgacgctcgggccacccaaagaggagagtgacttcttcaacctcctggacatctggttc
cccgacaagaaacccctccccaccgccttcctggtggacacctccgaggaggccctgctg
ctacctgattggttgaagctgaggatgatccggtcagaggtttcacgattggtggatgca
gcgctgcaggatctggagccccagcagctgctgctgtttgtccagtcatttggcatccct
gtgtccagtatgagtaagctgctgcagtacctggaccaggctgtatcccacgactcacag
acactggaacagaacatcatggacaagaactacatggctcatctggtggaggtgcagcat
gagcgaggcgccacaggggggcacactttccacgggttgctcagctcctctctccctcct
cgcagagatagtactgaggtgaacagagccaaagttactgtggaaactcctagtggctcc
ttgaagatgagagccaatcagatcccagtgattgggcctgaggatgacctcaccggcatg
ttgcttcagatgttccctctgaaggtggaccaccgcaggcccagcccccctacccggccc
ctctccctggccctgcagcaggctctggcccaagagctggtgcgtgccagacaggggggg
cacccccagcaggatggggtgtcagtgcgtctcctacaggccctggctgccctgctcagc
tctgcccacgccggggccctcgtcatggccatgaaccgcagccacgccctgtcctgcccc
atgctgcgccagctgcatctctaccagcggctggtgttgcaggacgtggccttctcctct
ctcttcttcaaggctgtcatggagatgatgacatggttggagaacccggccgtggaggcg
gggccgctgcgggccttgctcaagtccttcgctggacagtattcccagaagcaccggctc
actgatgttcgtacaggcttcctccacctggctgaggccctggcttatcagagggactcc
gaggtggccgtgagggctataatcgccacactgaaggcaggggagagatgtaatgcagag
ccggaactgataggcaaagtgttacaggggctagtggaggggaagtctccatatttggag
gaactgctggccttgctaatgactattggaacagagacggggaccggctctaccaccgca
ggccctgttgccatggtgatagcgctgcttctccaggagactgaagagcaagctgtgaaa
atggaggtggatacaaacaacagcagctccgaggtgacaaagactgggtccagctcaggg
ctgcttgttgattggctgggacttcttgaccctgaggtcacatctgtgtgtccagacctt
cagcgtaagctgctctttgctctcaacaagggtaaaggaactccctcctacagaccatac
cttttggcattgctgacccatcagtccaactggacaactcttcatcagtgcatcagtgct
cttctcagcaagcagcaagaccagcgactggacccatcttctgctctggacttcctgtgg
gcctgcagtcacatccctcgtatctggcagggccgggaccagaagaccccacagaaacag
acagatacatttgtcctgcgtttgaacccggaggagcttatcagtctggtggacctcatc
atgtcagagtctgagctcaacagccgcggcgactcctcgccccctgccaacgcccccgac
aaggccaagagcaccctggaccaaacctcctgctccctcatccagtcacggctgcccctg
ctccacagctgttgccatggcgacctggtgagagtgaagaaagtctcggaatacctcatc
aactgcacaaagaaatggggagacagtgtgatgagtaagcggtgccagaacctcctgctc
cagctctacctgcacttcccagaggtcatccagcacgtgaccttacctgacgccaccctg
agcagcgagggggctgccgacggcaccacatgcaagcacgacgtcctggttcaccgtctg
gtcacgttgctaggcgatacgggagacacaaagtcggctgagaaccggatgtcagacgct
aacctggcctgcaggaagctggctgtgtcccaccctgtcctcctcctcagacacttgcca
atgatcggagcacttctccacggacgcatccacctcaacttccaggagttccggagccag
aaccacctgacattcttcagcaacgtgctggccatcctggagctgctgcagccattagtg
ttccacaatgaacaccagagggcgctgcaggactgcctgctctccttcatgaagatcctg
cagaacctcaggagacctcgtatgcatccgttggccgtcttcagtaaatatgtgcagttc
attcagaagtatattacccacgatgcagcaacagccattccctatctacagaagcattcc
gatatcctacaggggctctcggcagagcaccctgacgtgctgctcaaatccctgctggct
ggcctcaccctgcctgtgaagactggctcctctgacagctctgcagaggacagagatgat
gagtcgtcctctggttccctgcccatggtcagtatctcggcctccgttccactgactgca
gctgacatgaccaagtacctgaagaagatctccaggggagaagccatcgaagacgtgctg
gaagttctgaccgaggtggaggacaagtccaagaggaatcctgagatcatccagtacttc
actaatgacctgcagagactgatgacttctactgaggagttgtgtcgtaacatggccttc
agcctggccctacgctgcatccagaacaacccgtgcactgcagcagacttcctgcccacc
ttcatgtactgtatgggcagcgggaactttgacgtggtgcagacggcgcttaggaacctg
ccagaatacgtgctgctctgtcaagagcatgcagacatcttactccacaaggccttcttg
gtggggatctatgggcagattgacaccagctctatgatctctgagtccatgaaggtcctg
cacatggaggcaacaacatga
DBGET
integrated database retrieval system
