Oncorhynchus nerka (sockeye salmon): 115103736 Help Entry 115103736         CDS       T07952                                  Name (RefSeq) collagen alpha-1(IX) chain-like   KO K08131   collagen type IX alpha Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04510   Focal adhesion one04512   ECM-receptor interaction one04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:one00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115103736  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115103736   09142 Cell motility    04820 Cytoskeleton in muscle cells     115103736  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:one00535]     115103736 Proteoglycans [BR:one00535]  Extracellular matrix (ECM) proteoglycans   Others    115103736 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  115103736 NCBI-ProteinID:  XP_029480491 LinkDB All DBs Position LG21:complement(4794039..4809166) Genome browser AA seq 687 aa AA seqDB search MTRARIYRESLLVILLQIILICSAQRGLVGPRGPAGPPGIAGVPGVDGIDGDRGDDNFTE GGPGPDGEDGKPGTPGTPGLPGADGATGPVGGLGSDGPPGPKGEPGEAGEVGEIGEGPDG PNGAAGAQGLVGELGKVGTPGSLGRRGPVGLPGPAGPRGLPGVYKGEDLCPNACPSGLNG YSGLPGMKGHKGVKGESGEPGKQGHKGEEGDQAGEGEMGAQGLPGQGGPRGITGMMGLKG DRGPRGTFGDLGPQGIQGGSGDVGQRGLVGENGPNGGQGARGPQGIRGLPGGKGEPGLAG PDGREGIPGLPASKGITGKVGSPGDAGLQGLPGLPGAYGPKGKSGEMGNSGDPGSVGLMG SPGKSGERGEQGEVGPVGARGGPGERGVRGPDGPAGAPGPRGGKGDLGLLGLPGPAGLVG QNGDRGAVGLTGAQGEQGEAGSEGTAGDRGDFGDEGEPGEKGSTGRPGETGNKGPEGGRG IPGAEGKPGQPGPRGMQGDRGVPGLPGTQGPAGKKPSDTHITQVCMRVMQEQLAQLAASL RRPETGISGLPGPPGPPGPTGPSGENGYPGLDGARGLPGLKGPPGLLGRKGPKGDTGDRG DRGPTARGVKGAPGAPGLPGDHGRAAYGTDGRDGERGPHGVPGIPGVPGSPGRPGLNGYC ESSQCILPMVASPISAKDSSMKGPNEE NT seq 2064 nt NT seq  +upstreamnt  +downstreamnt atgactcgcgccaggatatatcgggagtcattactggtgattttattgcaaatcatcctt atttgctccgctcagaggggcctggtcggtcccagaggccccgcaggaccccctggaata gcaggagtgcctggagttgacggcattgatggagacagaggggacgataacttcacagaa ggcggccctggccctgatggggaagacggaaaaccaggaactcccggaacacccggccta ccaggggcagacggtgccactggacctgttgggggtctcggctcagatgggcctcctgga ccaaaaggggaacccggagaggctggggaagtcggggagattggcgagggacctgatggg cctaatggagcagctggtgcacaagggttggtgggcgagcttggcaaagtcggaacccca ggatcactgggaaggagggggccagtggggcttcctggacctgcagggcccaggggtctt cctggagtgtataagggggaagacctgtgtcccaatgcctgtccttctggtcttaacgga tattctggcctcccaggcatgaagggccacaaaggggtaaaaggagagtctggtgagcct ggaaagcaaggacacaagggagaagaaggagaccaggcaggagagggcgagatgggagct caaggactaccaggccaagggggacccaggggaataacaggcatgatgggcctcaaaggt gacaggggaccacgtggaacgtttggagacctcggtccccagggaattcagggtggctca ggtgacgtgggccaaagaggattagtgggcgagaatggaccaaacgggggtcaaggggcc cgagggccacaaggaataaggggccttccagggggcaaaggggagcctggtcttgctggg cccgatggacgtgaaggaatccccggattgccagcatctaagggtattactgggaaagtt ggcagtccaggtgatgctgggctccaaggactccctggtttgccaggcgcttatggtcct aaaggaaaaagtggcgagatgggtaactctggcgaccccggttctgtaggactaatgggg tctcctgggaaatccggtgaacgtggcgagcagggagaggtgggacctgtcggagcaaga ggtggaccaggtgaaagaggagtgcgtggcccagacggacctgcaggggcacctggaccc aggggaggtaaaggggatctcgggcttcttggtttgcctggccctgccggcctggttgga cagaatggagacaggggtgcagtcggtttgaccggtgctcaaggagaacaaggagaagca ggttcagagggcaccgcgggagacagaggggactttggtgacgaaggggagccaggagag aaaggatcgacgggcagaccaggagagactggaaacaaagggccggagggcggccggggc ataccaggcgcagagggcaagccgggccaacctggaccacgtggcatgcagggagacaga ggggtgccaggactgccagggacacaggggccagcggggaaaaaaccaagcgatacacac atcacacaagtttgcatgagggtaatgcaagagcagctggcccagctagcagccagcctg aggagacctgagacaggcatctctggactgccaggtccccctggcccccctggtcctaca ggcccctccggagagaacggctacccaggactggacggggccagaggactgccaggtctc aaaggacctccaggactactgggtcgcaaagggcccaaaggtgacacgggcgacagagga gacagaggacccacagcgagaggggttaaaggagcacctggagcacccggtctaccaggt gatcacggtagagccgcctatggcacagacggccgcgacggcgagagagggccacacggc gttcccggtattcccggcgttccagggtctcctggtcgtcctggcctcaacggctactgc gagtcgtcacagtgcatccttcctatggtggcatcaccgatatctgcgaaagattccagc atgaaagggccaaatgaggaataa

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