Oncorhynchus nerka (sockeye salmon): 115104270
Help
Entry
115104270 CDS
T07952
Name
(RefSeq) PHD finger protein 1-like isoform X1
KO
K11467
PHD finger protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115104270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115104270
03036 Chromosome and associated proteins [BR:
one03036
]
115104270
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115104270
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115104270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
DUF4537
ZrgA
Motif
Other DBs
NCBI-GeneID:
115104270
NCBI-ProteinID:
XP_029481494
LinkDB
All DBs
Position
LG3:complement(10953833..10971603)
Genome browser
AA seq
530 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFSVGVEE
VCCVCDAPPLKEPLINCLKCRHGYHPECHTPSIEPEADSNSWICRQCVFAVATKRGGAIK
RGRFARLMQIMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYEFQCSVCASGPETIQRLPMSWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFANENWDSLLLGSLSDTPRQDRCHNLLNALNSNKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITQRRRSDPLSLPCQRRAVGPESRKSKRRIMETQPCPPP
VPATPIDLVPCCHGYVGGTNLYNSRKSEEELNLGSPPKRMFALYHPTYNGAPAISRTLHH
YSAEDPCRVPPPCLPFSLSSSHHHHHHHHNHHHHQQQHHQHQPGQKLDPCPSLLLRDVPS
YPGSVGGGGGGDGSAVRGWGGGDGVRILARRVTPDGKVQYLVEWGNVSVY
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggggatgatgtgttagctcgatggagtgatggactactgtac
ctcggtaatgtgaaaagagtagatggagtcaagcagtgttgtctggtgagatttgaggac
aactcggaattctgggtcctaagaaaagacattcactctttctcagttggagtggaagag
gtttgctgtgtctgtgatgccccgcctcttaaagaacctctcatcaattgtcttaaatgt
cgtcacggttatcatcctgagtgccacactccgtccattgagccggaagctgacagcaat
tcttggatatgtcggcaatgtgtctttgcagtggcaaccaagagagggggagccatcaaa
cgaggacggtttgcccggctcatgcaaatcatgaaacttcggctgccctatcagctgtca
tctttagactgggacccacagcatctgaccaaccagcagcagtgttactgctactgtgcc
ggacctggagagtggaacctgaaaatgttgcagtgtggaagttgtggtcagtggtttcat
gaagcttgcacacagtgtctgaccaagccgttgttatacggagacaggttttatgagttc
cagtgctcagtctgtgcaagcggaccagagacaattcaacggctacccatgagctgggta
gatttggcccatttggtgctctaccacctctccttgtgctgcaagagaaaatactttgat
ttcgaccatgaaatcatgtcgtttgccaatgagaattgggactctttgcttctcggctcg
ctctctgacacaccaaggcaagatcgctgccacaatctgctcaacgctttgaactccaac
aaagacaggtttgtctctggtaaagagatcaagaagaagaagtgtctttttgggctccag
gtccgagctccgcctcccctgacctctgattcgtctcccctcatcactgacccgcccatc
aacatcacccaaaggagaaggtcagacccattgtcactgccctgccagaggagagcggtg
gggccagagtcacgcaaatcaaagcggcgcatcatggagacacagccttgtccgcccccg
gtcccagccaccccaatagatcttgtgccatgttgccatggctacgtaggtggaactaac
ctctacaactccaggaagtcggaggaggagctgaatttgggctctccacctaagcggatg
tttgccctgtatcaccccacctataacggagccccagccatctccagaaccctgcatcac
tatagtgcggaagatccttgtcgagtgccgcccccctgcctccccttctccctgtcatcc
tcccaccatcaccaccaccaccatcacaaccaccaccaccaccagcagcagcaccaccag
caccagcctggccagaagttggatccctgcccctccctcctgctgcgtgacgtcccttcc
tatccgggcagcgtggggggagggggcgggggggatgggtcagctgtcaggggctggggg
ggcggggacggggtgaggattttggcgaggcgagtaacgccagacgggaaggtccagtac
ctcgtggagtgggggaacgtgagtgtgtactga
DBGET
integrated database retrieval system
