Oncorhynchus nerka (sockeye salmon): 115104344
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Entry
115104344 CDS
T07952
Symbol
gipc1
Name
(RefSeq) PDZ domain-containing protein GIPC1
KO
K20056
PDZ domain-containing protein GIPC
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115104344 (gipc1)
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
115104344 (gipc1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GIPC1_GH1
GIPC1_GH2
PDZ
Motif
Other DBs
NCBI-GeneID:
115104344
NCBI-ProteinID:
XP_029481629
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Position
LG21:27375221..27380522
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AA seq
362 aa
AA seq
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MLDRTFWLPTKAASVHFHRQTEGINMPLGLGRRKKASPLVENEEAEPIRAGLNVSGMDGL
DGGGVGLGEGTTQEGLPPPPTSLRPRLIFHTQLAHGSPTGRIEGFSNVRELYTKIGEAFG
IAPPEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAHIKGQRKEVEVFKGEDALGLTITDNG
AGYAFIKRIREGSVVHQIQVINVGDMIESINGHSLIGCRHYEVAKMLKELPKGKDFVLKM
VEPLKAFDMISQRSGGARAGSGTQLGTGKGTLRLRSKGPATVEELPSAFEEKAVEKVDDL
LESYMGIRDSELAATMVELGKDKKNPDEFAEALDETLGDFAFPDEFVFDVWGAIGDAKVG
RL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaggaccttttggctacctaccaaagcagcatctgttcacttccacagacag
acagaagggataaacatgcctcttggattgggtagaaggaagaaagcatctccactagtg
gagaacgaggaagccgagccaatccgagcgggccttaatgtctcaggaatggacggcctg
gatggaggtggtgtggggctcggggagggtactacccaggagggtctgccacccccaccc
accagcctgagacctcgtctgatcttccacacccagctagcacacggtagccccacggga
cgcatcgagggcttcagcaacgtgcgagagctctacaccaagatcggagaggcctttggg
atcgcaccaccagaggtgatgttctgcactctgaacactcacaaggtggacatggacaag
ttactggggggtcagattgggctggaggactttattttcgcccatatcaaaggccagagg
aaggaggtggaggtgttcaagggggaggacgccctggggttgaccatcactgataatgga
gctggatacgccttcatcaagagaataagggagggtagcgtggtccatcagatccaggtc
atcaacgtgggagacatgattgagtccatcaacggccacagtctcattggctgtcgacac
tacgaggtggccaagatgctcaaggagctgcccaaggggaaggactttgttctcaagatg
gtggagcccttgaaagccttcgacatgatcagccagaggtcaggaggggcccgggctggc
tcagggacccagctggggacagggaagggcaccctgcgtttacgctccaaaggcccagcc
acggtggaggagctgccctctgcgtttgaggagaaggccgtagagaaagtggatgacctc
ctggagagttacatgggcatcagagacagtgagctggctgctacaatggtggagctgggg
aaggacaaaaagaacccagatgagtttgccgaggcgttggacgagactcttggtgacttc
gccttcccggatgaatttgtttttgacgtctggggtgccatcggggacgccaaggtcggc
cggctgtaa
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