Oncorhynchus nerka (sockeye salmon): 115104850
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Entry
115104850 CDS
T07952
Name
(RefSeq) polyadenylate-binding protein 2-B-like isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115104850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115104850
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115104850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115104850
NCBI-ProteinID:
XP_029482038
EnsemblRapid:
ENSONEG00000017965
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All DBs
Position
LG22:complement(1336711..1357362)
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AA seq
322 aa
AA seq
DB search
MAEFGNGLDSGMTEESLLDSDPGHPELEDPGVGDEEPGLEEGEAAIEDPELEAIKARVRE
MEEEAEKLKELQNEVEKQMNLSPPPAGPVIMSIEEKMEADARSIYVGNVDYGATAEELEA
HFHGCGSVNRVTILCDKFTGHPKGFAYIEFSDKESVRTAMALDESLFRGRQIKVGVKRTN
RPGISTTDRGFPRARFRSRGGNFNSSRARYYSGYAPPRGRGRAFRGLPPMYVKPGVDQSA
VHWESGVSPWSVCPTVSLSVRFQDQWRLTTPPPVAAAPPNVSAGSLSLSAPAMHTHPILS
VWGGGGQGDHRATAGGVYYNKR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttcggtaacggactggactcaggaatgacggaggaatccctactggactca
gacccagggcatccagaactagaagacccgggtgttggcgatgaggagccgggtttagag
gaaggagaagctgcaattgaggacccggagctggaggcaatcaaagcccgggtgcgagag
atggaggaggaagcagaaaagctgaaggagttacagaacgaggtggagaaacagatgaac
cttagccctccaccagccggtcccgtcatcatgtccatcgaggagaaaatggaagccgac
gcaagatcaatctacgttggaaacgtggattacggcgccacggcggaggagctagaagcc
cacttccatggctgcggctccgtcaatagagtcaccatcctgtgcgacaagttcacaggg
catcccaaagggtttgcctatatcgagttttcagacaaggagtctgtgaggacggccatg
gcgttggacgagtctctgttcagaggaaggcagattaaggtgggggtgaagaggacgaac
aggccaggcatcagcaccacagaccgcgggttcccccgggctcgcttccgctcacgagga
ggaaactttaactcgtcacgcgcacgttactacagtggctacgcaccgcccagaggcaga
ggacgggccttcaggggcttgccccctatgtatgtaaaacctggagtggatcaaagtgct
gtgcactgggagtctggtgtgtctccctggagtgtgtgtcctacggtgtctctcagtgtg
aggtttcaggaccagtggaggctgacaacccctcctccagtggccgcggcgccccccaat
gtctcggcagggtctctctctctctctgctcctgctatgcacactcaccccatcctgtct
gtgtgggggggagggggtcagggcgatcacagggccactgcagggggtgtttactacaac
aagcgttga
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