Oncorhynchus nerka (sockeye salmon): 115104883
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Entry
115104883 CDS
T07952
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115104883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115104883
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115104883
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
T_cell_tran_alt
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
115104883
NCBI-ProteinID:
XP_029482116
EnsemblRapid:
ENSONEG00000019865
LinkDB
All DBs
Position
LG22:complement(3413298..3616345)
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AA seq
1971 aa
AA seq
DB search
MATVLLPPGPDSLHRFTWESLAAVEQRIAEEEARRTKHYQEDLGDVELPRPRADLEAGKQ
LPRIFGDIPNGLVGVPLEDFDPFYFMNQRTFIVLNKGKAIFRFSATSALYIFSPFHPVRR
ASIKVLVHSLFSLFIMCTILTNCCFMAMSEPEYWAKYVEYTFTGIYTFESLIKILARGFC
VGPFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVRSTAHCVNNTLNTNTTFFCNN
RTWSSLKDFIADEDNYYKVEGAKDALICGDGSDAGHCPDGFECRKAGRNPNYGYTSFDSF
GWAFLSLFRLMTQDYWENLYHQTLRSAGKTYMVFFVVVIFLGSFYLVNLILAVVAMAYEE
QNQATIQEAWQKEREFQLAMECLKKEAQKAQDTDSLIFLDLSPGLALPDNKELQSRRRSL
EGLVEEMENEGDVEKGDVKTLKVDTVDGGRPTHPLLIRTISTRTRRGSNVSIFNFNRRNK
DSEGDFADDELSVHGDNEGTHSRAGSLVVPWSTRRRPSTYSTGSRGSQVFLNINGKLFVA
MDQNGVTPQGLPACTIERVREESRPNSSTELSNMLLPRQVSRQEHARRDRALSAASYLTD
ALEELEESHQKCHPCWYEFAHKYLIWESSPRWLRLKVLVKVMVMDPFLDLAITICIVLNT
LFMAMEHYPMTDEFNGMLSIGNLVFSGIFTAEMVLKIIALDPYYYFQQGWNIFDSIIVCL
SLMELGLSDVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKNYQDCVCKISKDCTLPRWHMKDFFHSFLIVFRVLCGEWIETMWDCMEV
AGQPLCILVFMLVMVIGNLVVLNLFLALLLSSFSSDNLSAPDDDGEMNNLQIALGRIKSG
MGWLRSQICDFFNGNFKRRRQKRKETKAMVKLKRLSHGAPLGEVGNGTVVTVGGGIGVIG
RHGEKIMVPEVDDSYMTNPNLTISVPIAPGESDVEFPEEDDDDEDESESSEEEEEEVEES
KQVKDDISLSEGSTVDLRKPGEEEDEYSEMAEETMDPDNCFPDVCVRHFQCCDIQTTAGL
GQAWWRLRKTCFQIVEHSWFESFIIFMILLSSGALAFEDIYIEQRKVVKVVLEYADKIFT
YIFILEMLLKWIAYGFKKYFTNYWCWLDFLIVDVSLVSLVANTLGYSDFAAIKSLRTLRA
LRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYGRCVNQT
GYIHNVSMVNNKTDCRAMNDTQFYWTRVKVNFDNVGAGYLALLQVATFKGWMEIMYAAVD
SRAVDEQPIREVNMYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKRKLGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPLNQVQGFFFDLVGKQAFDIIIMVLILLNMITMMVETD
EQPARMEYILNKINLAFIIIFSCECLIKIMALRCYFFTIGWNIFDFVVVILSIVGIVLAD
IIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMANFAYVKKQAGIDDMFNFETFGNSMICLFQITTSAGWDGLLSPILNNSPEECNP
NLVHTGTNARGNCGNPSVGITFFVTYIIISFLIVVNMYIAIILENFSVATEESTEPLSED
DFEMFYEVWEKFDPEATQFIEYAKLSDFADTLSEPLRIGKPNKIKLISMDLPMVSGDKIH
CLDILFAFTKRVLGESGEMDALKQQMEEKFMMANPSKISYEPITTTLRRKQEDMSAAVIQ
RCYRRHLLRRQMKQASFMYRSMQINLTQSSTDKTVTAPEKEGLIASMIKENYGGPEMELM
ETLSSTSSPPSYDSVTRATSELFQVLILEQSRNSDLSEHCLAPDRDRETFL
NT seq
5916 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtgctgctaccaccgggtcctgacagcttgcaccggtttacctgggagtcc
ctggctgccgtggagcagcggatcgccgaggaagaggcccggcgcaccaagcactaccag
gaggacctgggagatgtggagctgcccaggccccgggccgacctggaggccggcaaacag
ctgccgcgcatcttcggcgacatccccaacggcctggtgggcgtcccactggaggacttc
gacccgttctatttcatgaaccagagaacttttatagtactgaacaaagggaaggccatc
ttccgatttagtgccacatctgcactctatatttttagcccctttcatcctgttagaaga
gcatcaataaaggttttagtacactcgttattcagtctgttcataatgtgcactattttg
accaactgttgcttcatggccatgtcggaaccagagtattgggccaagtatgtagagtac
actttcactggcatttacacgtttgaatcgttgataaagattctggcaaggggattctgt
gtggggccatttaccttcctgcgggacccttggaactggctggatttcagtgtgattgtc
atggcatatgttactgaatttgtggacctgggcaatgtctcagcattacggacattcaga
gtcctacgagcactgaaaactatctcagtcatcccaggcctgaagaccatcgtgggtgcg
ctgatccagtcagtgaagaagctggcggacgtgatgatcctaaccgttttctgcctcagt
gtgttcgccctcatcggccttcagctcttcatgggtaacctacgacagaagtgcgtacgc
agcacggcgcactgcgtcaacaacaccctcaacaccaacacaacctttttctgcaacaac
cggacgtggtcctcactcaaagactttattgcagacgaagataactactacaaagtggag
ggagcgaaggatgccttaatatgtggggacgggagtgatgctgggcattgcccagatggg
tttgaatgtaggaaggcaggaaggaaccctaactatggttacaccagctttgacagcttt
ggttgggcgtttctctccctcttccggctgatgacacaagattactgggagaacctctat
caccagactctgcggtcagcaggaaagacctacatggtgtttttcgtggtggtcatcttc
ctggggtcattctacctggttaacctgatcctggctgtggtggctatggcctacgaggaa
cagaaccaggccactatccaggaggcctggcagaaagagagggagttccagctggccatg
gagtgcctcaagaaggaagcgcagaaagctcaagacacagattcattgattttcctggac
ctgtcccctggcctggctctgcctgacaacaaggagttgcagagcaggaggagaagtcta
gaggggctggtggaggagatggagaacgagggagacgtggagaagggagacgtgaaaaca
ttaaaggtggatacagtggatgggggcaggccgacacaccccctcctcatccgcaccatc
tccacgcgcactagacgaggaagcaacgtcagtatatttaacttcaatcgccggaacaaa
gactcagagggtgactttgccgacgatgagctcagtgtccatggggacaatgaggggaca
cacagtcgtgctgggtccctggtggtcccgtggagcaccagacgcaggcccagtacctac
agcacgggcagccggggttcccaggtcttcctcaacatcaatgggaagctgtttgtggcc
atggaccagaacggggtcaccccgcagggcctcccagcatgcaccattgagagggtcagg
gaggagagtaggcctaactccagcacagagctgagcaacatgctgctccctcgccaggta
tccagacaagagcacgcacgcagggaccgagctctgagcgccgccagctacctcaccgac
gccttggaggaactggaggagtcgcatcagaagtgccacccctgctggtatgagtttgcc
cacaagtacctgatctgggaaagcagtccacgttggcttcggttgaaggtactggtcaag
gtgatggtgatggatcccttcctggacctagccattaccatctgcatcgtgctcaacacc
ctgttcatggccatggagcactaccccatgactgacgaattcaacggcatgctgtccata
ggcaacctggtattctccgggatcttcaccgctgagatggttttaaagatcatcgctctg
gatccatactactatttccaacaaggttggaacatatttgacagcatcatcgtgtgcctc
agcctcatggagctgggcctgtccgacgtggaaggactgtccgttctccggtccttcaga
ctgctgagggtgttcaagttggccaagtcgtggcccaccctcaacacactcatcaagatc
atcggcaactcggtgggcgccctgggaaacctgaccctggtcctagccatcatagtcttc
atctttgccgtagtgggcatgcagctgttcggcaagaactaccaggactgtgtgtgtaag
atctccaaggactgtacgctgccgcgctggcacatgaaggacttcttccactcgttcctc
atcgtattcagggtgctgtgcggcgagtggatcgagaccatgtgggattgtatggaggtg
gccgggcaacctctctgcatcctggtcttcatgctcgtcatggtgatcgggaacctagtg
gtactcaacctcttcctagccttgctgctcagctcattcagctcagacaacctctcggca
cctgatgacgacggcgagatgaacaacctgcaaatcgctcttggtcgcatcaaaagcggc
atgggctggctccgaagccagatctgcgacttcttcaacggcaacttcaagaggcgacgg
cagaagagaaaagaaacaaaggccatggtgaagctcaagaggctgagccacggtgctccg
cttggcgaggtgggcaacgggacagtggtgacggtggggggagggatcggggtgatcggg
cgccacggagagaagataatggtcccggaggtcgatgacagctacatgacaaaccccaat
ctgaccatcagcgtgcccatcgctcctggcgaatcagacgtggagttccctgaggaggat
gatgatgatgaggatgagagcgagagctctgaggaggaggaggaggaagtggaggagagc
aagcaggtaaaggatgacatcagcctttcagagggcagcacagtggatctgaggaagcca
ggggaggaagaggatgagtattcggagatggccgaagagaccatggatcctgacaactgc
ttccctgatgtatgcgtgcgccacttccagtgctgtgacatccaaaccacggcgggcctg
ggccaggcatggtggcggttgaggaagacctgctttcagatcgtggagcacagctggttc
gagtccttcatcatttttatgatcctgctgagcagcggcgctctggcctttgaggacatc
tacatcgaacagagaaaagtggtcaaagtggtgctggagtatgccgacaagatcttcacc
tacattttcattctggagatgctcctcaagtggattgcatacggattcaagaagtacttc
actaactactggtgctggctggatttcctgattgtggatgtgtctttggtgagcctagtg
gctaacacgcttggctactcggacttcgctgccatcaaatcacttagaaccctcagagct
ctgaggccgctaagagcactgtcccgatttgaaggcatgcgggttgtggtaaacgccctg
atcggcgccatcccatccatcatgaacgtactgctggtgtgcctgatcttctggctcatc
ttcagcatcatgggggtcaatctgttcgccggaaagtacggacgctgcgtcaaccagacg
ggctacatccacaatgtgtccatggtcaacaacaagaccgactgccgggccatgaacgac
acgcagttctactggaccagagtcaaggtcaacttcgacaacgtgggcgctggttacctt
gccctcttacaagttgctacattcaaaggctggatggagatcatgtatgcagcagtggat
tctcgtgctgtggacgaacagcctatcagagaggtcaacatgtacatgtacctatacttc
gtcattttcatcatctttggctccttcttcacccttaacctcttcattggtgtcattatt
gacaacttcaaccagcagaaacgaaagttaggtgggcaagacatcttcatgacagaggaa
cagaaaaagtactacaatgccatgaagaagctagggtctaaaaagcctcagaaaccaatt
ccaaggccattgaaccaagtgcagggcttcttcttcgacctggtgggaaagcaggcattc
gacatcatcatcatggtcctcatcctgctcaacatgattaccatgatggtggagacggac
gagcagccggcccgcatggagtacatcctcaacaaaatcaacctggccttcatcatcatc
ttctcctgcgagtgcctcatcaagatcatggctctacgttgctacttcttcaccattggc
tggaacatcttcgactttgtagtggtcatcctctccatcgttggtatcgttctggctgac
atcatagagaagtactttgtgtcgccgacactgttccgagtcattcgattggccaggatc
ggacgagtacttcgactcatccgtggagccaaaggaataaggaccttactctttgcctta
atgatgtcccttcccgccctattcaacatcggcctcctgctctttctggtcatgttcata
tacgccatctttggcatggccaactttgcctatgtcaagaagcaggcgggcatcgacgac
atgttcaacttcgagacgttcggcaacagtatgatctgcctatttcagatcaccacgtca
gcgggctgggacggcctgctcagccccatcctcaacaactctccggaagagtgcaacccc
aacctcgtccacacaggcacaaacgcccggggcaattgtggcaacccctcagtgggcatc
accttctttgtcacctatatcatcatctccttcctcatcgtggtcaacatgtacatcgcc
atcatcctggagaacttcagcgtggccaccgaggagagcaccgagccgctgagtgaggac
gacttcgagatgttctatgaggtgtgggagaagttcgacccagaggccacgcagttcatc
gagtacgccaagctgtcagactttgccgacacactgtcggagccactgcgcattggcaag
cctaacaagattaagctgatctccatggacctgcccatggtcagtggagacaagatccac
tgcctggacattctgtttgccttcaccaagcgtgtgttgggcgagtcgggcgagatggac
gctcttaagcagcaaatggaggagaagttcatgatggccaacccatccaagatctcctac
gagcccatcaccaccacgctgaggcgcaaacaggaggacatgtccgccgcagtcatccag
aggtgctaccgccggcacctgttgcggaggcagatgaagcaagcctccttcatgtacaga
tcaatgcagatcaatctgacgcaaagctccacggacaagacggtcaccgccccggagaaa
gagggcctcatagcctccatgatcaaagagaactacggggggcctgagatggagctgatg
gagaccctgtcctccacctcctctccgccgtcttatgacagcgtcacacgggcgactagt
gaacttttccaagttttaattctcgaacagtccaggaacagtgacctaagcgaacattgc
cttgcccccgacagagaccgtgagacatttctgtaa
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integrated database retrieval system
