Oncorhynchus nerka (sockeye salmon): 115104914
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Entry
115104914 CDS
T07952
Name
(RefSeq) ras-responsive element-binding protein 1-like isoform X1
KO
K20210
ras-responsive element-binding protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115104914
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115104914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-H2C2_5
zf-C2H2_6
zf-Di19
zf-C2H2_jaz
zf-C2H2_8
zf-C2H2_11
zf-C2H2_REST
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
115104914
NCBI-ProteinID:
XP_029482176
LinkDB
All DBs
Position
LG22:complement(5731995..5804372)
Genome browser
AA seq
1836 aa
AA seq
DB search
MSRRKQPNPNKVELMESTMESTRPGGGVSVELSAGETEHSEEQETPDSTHTQDKHTGSNG
AMEEEEEEGMAGEKGENMTEEEGVDLSSINTMLSTVMNAGQLNGALEPSTPSTPISKTTL
PRPPSVNRNARRNTTEAKDFSTDFICPLCDKDCMTQHQLTMHIRQHNSDNGATDHSCSIC
GKALSSASSLDRHMLVHSGERPYKCSFCGQTFTTNGNMHRHMKIHDKDPAGVVPTSPPLP
TKRRRPSAKRRSAMDEDKERSDEPAKKKVLEESVLEELGSGQGDDEVLPCPICFKTFGCK
YDLEVHMDTHPDTTLRCDLCCLSFRTHRGLLRHNAGIHKQLPIDPGGQPFIQNNPSIPSG
FNDLAFIDFSCHKFPHIAQVWCETNLRRCTSKFHRFVCEACDKGFPLLSALVLHKTTIHQ
QQPSPTGSAQEPPAAQEKPATPAPQQASFLETLGLQHISQVKLQPSEDEVRQAQLDSIRV
IQVEPLASTLPQEVDSAAAESLGLVAASSLQGLSQREALSLLSLQPFPTGFLFHPVGGST
IKPVCGEVGLMELADIQQILKVASTAPGQMGLLPSLAKAPHWGVSSQGQAAGCKLMPPLK
PKPMVAPRSSLAASTLPPLQSTQQASLGCISPSLPPPASQLLNMPQESSSSSSSSSGSQA
LEKMQMEADCMGDAHMPNDSTELQIKQEEGQAAGGKKGAGGSNRGGIKASYPCRFCDQVF
VYSGVLQAHMRFHLGILPHQCNICDYVAPDKATLIRHLRTHSGERPYICRVCHYPFTVKA
NCERHLRKKHMKNTRKEIEKNIKYVSSTTTQDPLELASAGDTACRFCGEDLKSYRALQIH
LRTHNGCQRKPFECRRCGAAFLAKRNCIHHMLKQHPEVQEREIEEHIATLLPAITATTSR
ASSSSPLALNGLTPTPSATMHPVKVEDFSIYSSSGDLDQPLDFSNKSRGGGGSSSGSGSL
AGSPGIKLETVSLVAYDCSMEPIDLSIPKNPNKRLKRDATAVDTMSVERREIKKELPFPS
VLDHLPSAIQLDKSYEENLKTPQSGSYQLPPVTISPLLISTPTATGRALRLKPLLPKPTS
SSSSLKELPPLASIAQIISSVSTAPDLLKREPTPDNKAGAGLNGLQTEPERLVGGDNSSE
ASIEELPLEGSSRKRTRKKPASQAKTIAPARVPTPEQNTDSGMDLESSGEFASVEKMLAT
TDANKFSTYLRTGAVELGRRDEGRQSQGEEKESPPHSVPPQSKGGKKNAYSNSVQKMTCP
FCPRVFPWASSLQRHMLTHTVFSNVLSATGQKPFPCPKCDAFFSTKSNCERHLLRKHGVT
NRSLRRNGQMSKNKDGDEGSHDSAESSENEQTAGEALDLSSMDPDQKSSASESPSADQTP
DTAELLLGEMEPQSNNNNIENDDNDDSQSNKSLDLNFASKLIDFKFSSEGQQPQTSLVGD
KVVAVAEPDRVTAAQQQDQEPSKYTCKRCKKNFRYAATLARHEKAHLCETAPPEEACGTE
ETGPAPEDLPNTTTTTAEEEDQEEGEGEKEAPESEGVGSVMDSGSEEEEKKEERSDEEGA
AEPKNEGEAGRGSGSKADKRKKICNVCSKRFWSLQDLTRHMRSHTGERPYKCQTCERTFT
LKHSLVRHQRIHLKPRGSEGADGADANGAEAPAGDSASEEGECTPTSTCPPSENESEGTG
GAREEGGEGTEKEAPLPGPTSLAQSLSTTEPAQSESATEAIAEPLVEPVSEAVSESVPDP
PVEQTSDGPSETDVELNAEVSASEMARETDGNAATQTPTETPKESSTESPAPQPTTPEKD
PDGPSEGFIQGLLEIHTKPSLEHILPAGEAPLVGVE
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcgcaagcagcccaaccccaacaaagtcgaactgatggagagcaccatggag
agcacgcgtccggggggaggagtgagcgtcgagctgagcgctggagagaccgagcactcg
gaggagcaggagacccctgactccacacacacacaggacaaacacacagggagtaacgga
gcgatggaggaagaggaggaggaaggcatggctggagaaaaaggagagaatatgacagag
gaggaaggcgtggacttgtcatccatcaacaccatgttgtcgacggtgatgaatgcaggc
cagctcaacggagccctggagccttccacaccctccacccccatcagcaagaccaccctg
cccagaccccctagtgtcaaccgcaacgcccggaggaacaccacggaagccaaagacttc
agtacagatttcatctgtcccctgtgtgacaaggactgtatgacgcagcaccagctcact
atgcacatccgacagcacaactcggacaacggggcgacggaccactcgtgcagtatctgt
ggcaaggccctgagctcagccagctcgctggaccgccacatgctagtgcacagcggagag
aggccctacaagtgctccttctgcggacagactttcaccaccaacggcaacatgcacaga
catatgaagatccatgacaaagacccggctggcgtcgttcccaccagcccccccttgccc
accaagagacgccgcccctccgccaagaggaggtcagccatggacgaggacaaggagcga
agcgacgaaccggccaaaaaaaaggtgctagaggagagtgtgttggaggagttgggttca
ggccagggggatgatgaggtgttgccgtgcccgatctgcttcaagacctttggctgcaag
tacgacctggaagttcacatggacacacaccccgacaccacgctcaggtgtgacctgtgc
tgcctctccttccggacccaccgcggcctgctgcggcacaacgctggcatccataagcag
ctgcccatagaccccggcggacagcccttcatccagaacaacccctccatcccctctggc
ttcaacgacctggccttcattgacttctcctgccacaagtttccccacatcgcccaggtc
tggtgtgagaccaacctccgccggtgcaccagcaagttccaccgcttcgtgtgtgaagcc
tgcgacaaaggattccccttgctctcggccctggtcctgcacaagaccaccattcatcag
cagcagccgtcacccacagggagcgcccaggagccccccgcagcccaggagaagccggca
accccggcccctcagcaggccagcttcctggagaccctgggtctgcagcacatctcccag
gtcaagcttcagccttcggaggatgaggtccggcaagcccagttggacagcatccgggtc
atccaggtggagcctctggcctccaccttgccccaggaggttgattccgcggctgcggaa
tccctcggcttggtggcggcctcgtccctgcagggcctgtcccagagggaggccctcagc
ctgctctccctgcagcctttccccacaggcttcctcttccacccagttggtggttctacg
atcaagcctgtgtgtggcgaggttggcctgatggagctggctgacatccagcagatcctg
aaggtggcctcgaccgcccccggtcagatgggcctcctgccgtccctggccaaggctccc
cactggggagtgtccagccagggccaggcggccggctgcaagctcatgcccccactgaag
ccaaagcccatggtggcaccacgctccagcctggctgcctccacgctgccgccgctccag
agcacccagcaggcctccctgggctgcatcagccccagcctgcccccgccggccagccag
ctgctcaatatgccccaagagtcttcgtcatcgtcctcctcttcctcgggcagccaagcc
ctggagaagatgcagatggaggcggactgcatgggcgatgcccatatgcccaacgactcg
acagagctgcaaatcaaacaagaggagggccaggcggccggagggaagaagggggcaggg
ggttccaaccgcggcggcatcaaggcttcctacccctgccgcttttgcgatcaggtgttt
gtttactccggggtgctgcaggcgcacatgcgcttccacctgggcatcctgccgcaccag
tgcaacatctgcgactacgtggcgcccgacaaggccacccttatccgccacctgcgcacg
cacagcggcgagcgcccctacatttgccgcgtctgccactaccctttcaccgtcaaggcc
aactgcgagcgccacctgcgcaagaagcacatgaagaacacaaggaaagagatcgagaag
aacatcaagtacgtctcgtcgaccacaacccaggatcccttggagctggcctccgccggc
gacaccgcctgccgtttctgtggtgaggatctaaagagctaccgggctctccagatccac
ctacgcacccacaacggctgccagcgcaagccctttgagtgccggcggtgcggggcggct
ttcttggccaagaggaactgcatccaccacatgctcaagcaacatcccgaggtgcaggag
cgggagatcgaggagcacattgccacccttctccccgccatcacagccaccacctccagg
gccagctccagcagccctctggctctcaatggccttacgcccacccccagtgccaccatg
catccggtcaaggtggaagatttcagcatctactcctcctccggtgacttggatcagcca
ttggacttctccaataagagccgcggggggggtggaagcagcagcggttcagggagccta
gccggttctcctgggatcaaactggagacggtcagcctggtagcctacgactgctccatg
gaacctattgacctgtccatccccaagaaccccaacaagaggctgaagagagacgctact
gctgttgacacgatgagcgtggagcgccgagagatcaaaaaggagctgcccttccccagt
gtactggaccacctcccctcagcaattcagttggacaagagctatgaggagaatctgaag
accccccagtctggctcttaccagctccccccagtgaccatctccccgcttctcattagt
acccctactgccacaggccgggcgctccgtctcaagcccctgctgcccaaaccgacctct
tcttcctcctccctgaaagagcttccccctctggcttccatcgcccagatcatctcctcc
gtctcaacggctccagatttgctcaagagggagcccacgccggataacaaggctggcgcc
ggcctcaacggccttcagacagaaccggagcgtttagttgggggcgacaacagctctgaa
gcctcgatagaagagctccccctagagggctcgtccagaaagcgcactaggaagaagcca
gcgagccaggccaagactatagcacctgcccgtgtgcccacgcccgagcaaaacacagac
agcggcatggacctggagtccagtggggagtttgccagcgtggagaagatgctagccacc
accgacgctaacaagttcagcacctacctgcggacgggtgcggtggagcttggaaggagg
gacgaggggagacagagccagggagaggagaaagagtcgcctcctcattctgtgccgccc
cagtccaaaggagggaagaagaatgcctactccaactcagtgcagaagatgacctgtccc
ttctgtccccgggtcttcccctgggccagctccctgcagaggcacatgctcacacacact
gtcttctctaatgtgctgtcggctacaggtcagaagcccttcccctgtcccaaatgtgac
gccttcttctccaccaagtccaactgtgagcgccacctgctgcgcaagcatggcgtgacc
aaccggtcgctgcgccgcaacggccaaatgtccaagaacaaggatggcgatgagggatca
cacgacagcgcagagagttctgagaatgagcagactgcaggagaggctctggacctgagc
agcatggaccccgatcagaaaagctctgcatccgagtcgcccagcgcagaccaaacacca
gacactgctgagctgctgctaggggagatggaaccgcaatccaacaacaacaacattgaa
aatgacgacaacgacgattcgcagagcaacaagagcttggacctcaactttgccagcaag
ctcatcgacttcaagttctcgtcagaaggtcagcagccccagacctccctggttggagat
aaggtggtggcggtggccgagccagatagagtgacggccgcccagcagcaggaccaagag
ccctccaagtacacctgcaagaggtgcaagaaaaacttccgttatgccgccaccctggct
cgccacgagaaggcacacttgtgtgagactgcaccccccgaagaggcttgtggaacagag
gagactgggcctgccccagaggatctccccaacactactacaaccaccgccgaggaggag
gatcaggaggagggagagggagagaaggaggctccggaaagcgagggagtgggcagcgtg
atggacagtggttcagaggaggaggagaagaaggaggagagaagtgacgaagagggagca
gcagaaccaaagaatgaaggagaggcaggcagagggtcggggagcaaggcggacaagagg
aagaagatctgtaacgtgtgcagcaaacgcttctggtcactgcaggatctgacaagacac
atgcgttcgcacacaggtgagaggccctacaagtgccagacgtgcgaacgcaccttcacc
cttaagcacagcctggtgaggcaccagcggatccacctgaagccgcggggcagcgagggg
gcagatggagctgatgccaacggggcagaggccccggccggagactcagctagtgaggag
ggagagtgcacccccaccagcacctgccccccttccgaaaacgagagcgaaggcaccgga
ggggccagggaggagggaggcgagggaactgagaaagaggcccctctgccaggccccaca
tccctggcccagtccctgtccaccactgaaccagcccagtcagagtcagctacagaggcc
atagctgagccgctcgttgagccagtctcggaagcagtctctgaatcagttcctgaccca
cctgtagaacaaacctcagacggaccctctgaaacagatgtagaactaaacgctgaggta
tcagcctctgaaatggctagagaaacagatggcaatgcagccactcaaacgccaacagaa
acccccaaagaatcttccacagagtccccagccccacagcccactaccccagagaaagac
cccgatggcccctcggaaggcttcatccaaggcctactggagatccacaccaagccttcc
ctggagcacatccttcccgctggcgaggctcccttggtgggcgttgagtga
DBGET
integrated database retrieval system
