Oncorhynchus nerka (sockeye salmon): 115105319
Help
Entry
115105319 CDS
T07952
Name
(RefSeq) POU domain, class 2, transcription factor 3-like
KO
K09364
POU domain transcription factor, class 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115105319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115105319
03021 Transcription machinery [BR:
one03021
]
115105319
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115105319
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115105319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115105319
NCBI-ProteinID:
XP_029483100
EnsemblRapid:
ENSONEG00000041504
LinkDB
All DBs
Position
LG22:complement(38126128..38152014)
Genome browser
AA seq
394 aa
AA seq
DB search
MSTDGVEHSKAHHEQADIEQRQIKTENLNDSLHAHKTCHPAQGSPIPGVQASQLSVELPS
LHTMPQLVLMSGSHHLSSPSSFLLSQTQHTGHQALLQQNLHNFPTQSQSGLLQHQPGLAL
TPQAMSRSGLTSSSMEGHVDMSHLQVPKHIGALQQDDPSDLEELEQFAKAFKQRRIKLGF
TQGDVGLDMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSDSMANV
ASLPPLMEGYGRKRKKRTSIETNIKFTLEKRFLDNPKPNSEEITLISEQLSMEKEVVRVW
FCNRRQKEKRIYCPVSPSPMKSHNFNPRMASTSRSYSPLASGGVSSSPSPNSPSHGPSLG
TLSSGSPALTSQVNQSFSSPGSWYRTWNPMPYHH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagatggtgtggaacactcaaaggctcaccatgaacaagcagacattgaacaa
agacaaattaaaacagagaacctcaacgactctctccatgcacacaaaacatgtcacccg
gcacaaggatccccaatacctggagtccaagcaagccagctgtcagtggagctcccctcc
ctccacaccatgccgcagctggtgcttatgtcaggctctcaccacctctcatccccctcc
tccttcctcctctctcagacacaacatacggggcatcaagcacttctgcagcagaacctg
cacaactttcccacccagagccagtcaggtctcctccagcatcagcctgggttagcacta
acacctcaggccatgagtcggtcgggcctgacgtcgtcgtccatggaaggacacgtggac
atgtcccacctgcaggtccccaaacacatcggggccctccagcaggacgatcccagcgac
ctagaggagcttgaacagtttgccaaggccttcaaacagagacgcatcaaactgggcttc
acccagggtgatgtaggcctggatatggggaaactgtatgggaatgacttcagtcagact
accatctcccgcttcgaggcactcaacctgagcttcaaaaatatgtgcaagttgaagccg
ctactggagaagtggctgagcgacgcagagaattctccctctgactctatggccaacgtt
gcctctctaccccccctgatggaaggctatggaaggaaaaggaaaaagagaacaagcatt
gaaaccaacatcaagttcaccctggagaaacgctttcttgacaaccccaagcctaactcg
gaggagatcacgctgatttcagagcagctgtctatggagaaggaggtggtgcgggtgtgg
ttctgtaaccgtagacagaaggaaaagaggatctactgccctgtgtccccctcacccatg
aaatcacataacttcaaccccagaatggcctccacgtccagatcatacagccctcttgct
tcaggaggagtgtcatcgagtccctctcctaatagtcctagtcatgggccttcgctcggc
acactctcgtctggctcccctgctttgacctcccaggtcaaccaatccttcagctcacca
gggtcgtggtatcgcacatggaaccctatgccctatcaccactga
DBGET
integrated database retrieval system
