Oncorhynchus nerka (sockeye salmon): 115107628
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Entry
115107628 CDS
T07952
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115107628 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115107628 (crnkl1)
03036 Chromosome and associated proteins [BR:
one03036
]
115107628 (crnkl1)
Spliceosome [BR:
one03041
]
Complex B
Other components
Prp19-related factors
115107628 (crnkl1)
Complex C
115107628 (crnkl1)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115107628 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_16
U3_assoc_6
Mad3_BUB1_I
SR-25
Motif
Other DBs
NCBI-GeneID:
115107628
NCBI-ProteinID:
XP_029486936
LinkDB
All DBs
Position
LG24:5089877..5096472
Genome browser
AA seq
787 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEVQRARSIYERALDVDHRNIALWLKY
AEMEMKNRQVNHARNIWDRAITILPRVNQFWYKYSYMEEMLGNIAGCRQVFERWTEWEPE
EQAWHSYINFELRYKEVDKARSIYERFVIVHPDVKNWIKYARFEEKHGYIAHGRKVFERS
VEFFGEEHVDENLFVAFARFEEKQKEFERVRVIYKYALDRIPKQQAQELFKFYTVFEKKF
GDRRGIEDVIVSKRRFQYEEEVKASPHNYDAWFDYLRLVESDADPDTAREVYERAIANIP
PIQEKRHWRRYIYLWINYALYEELEVKDPERTRQVYLACLDLIPHKKFTFAKMWLLYGQF
EIRQKNLQAARQGLGTAIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFASENCTT
WIKFSELETILGDTERARAIFELAIGQPRLDMPEVLWKSYIDFEIEQEEYDNTRGLYKRL
LQRTQHVKVWISYAQYELSIDTSDRLQRCRGIFEEANKGLRSCEEKEERLMLLESWKEFE
QEFGSDTTRERVKKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQQEEDDEEDDEEDEEENNGEVDRGKVEEVRGKEMEGEENGRGERGIDKEMTEDL
ASPSSEKPIVSEPVPEKVLKESTYDDRDDSDESSSGSSSSSSSSSSSSDNDGGEKQPRKS
NKDSVKD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcatctactgcggcagggaaacagaggataccgaaagtagcgaaggtgaaaaacaaa
gctcctgcagaggtacaaatcacagctgagcagttgctcagggaggcaaaggagagggag
ctcgagcttctgccaccgccacccaagcaaaagatcactgatgaagaggagttgaacgat
tacaagttgaagaagaggaagggatttgaagacaacatcagaaagaaccgtactgttatc
agcaactggataaaatacgctcaatgggaggagagcctgaaagaagtccagagggctcgc
tctatttacgagcgtgctctggatgtagaccaccgaaatatagctctgtggctgaagtat
gccgagatggagatgaagaaccggcaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcttgccccgtgtcaaccagttctggtacaaatacagttacatggaagagatg
ctgggcaacatcgctggctgcagacaggtgtttgagcgctggacagagtgggaaccagag
gaacaagcctggcactcctacatcaactttgagctgcgctacaaggaagtcgacaaggcc
cgctccatctatgagagatttgtgattgtccaccctgatgtgaagaattggattaagtac
gcccgttttgaagagaagcatggctacatcgcccatggaaggaaggtgtttgaaagatca
gtggagttctttggcgaggagcatgttgatgagaacctctttgtggccttcgccagattt
gaagagaaacagaaagagtttgagagagttcgagtcatctacaaatacgccctggacaga
attcccaagcagcaggctcaggagcttttcaagttctacactgtgtttgagaagaagttt
ggagaccggaggggaatcgaggacgtcatcgtcagcaagaggagatttcagtatgaagag
gaagtcaaggcaagcccacacaattatgacgcatggtttgattacctacgcctggtggag
agtgacgcggatcctgacactgccagggaggtctatgagagagccatcgccaatatccct
cctatacaggagaagaggcactggagaagatacatttacctgtggataaactacgctcta
tatgaagaactggaggtcaaggacccagagagaacaaggcaggtgtacctggcatgtctg
gatctcatccctcacaaaaagttcacgtttgccaagatgtggctactctacggacagttt
gaaatccgccagaagaacctccaagctgctagacaaggcttgggcacagccattggtaaa
tgtccaaagaacaagctgtttaagggctacattgaactggagctgcagctcagagagttt
gaccgatgtaggaagctttatgagaagtacctggagtttgcctccgagaactgcaccacc
tggatcaagttctctgagctggagaccatcctgggagacacagagagagcccgggccatc
ttcgagctggccatcggacagccacgactggacatgccagaggtgttgtggaagtcctac
atcgactttgaaatcgagcaggaagagtatgacaacaccagaggtctctacaagagactg
ttgcagcgcacacagcacgtcaaggtctggatcagctatgcccagtatgagctgtccata
gatacctctgaccggctgcagaggtgtagggggatctttgaggaggccaacaagggcctg
aggagctgtgaggagaaggaggagcgtctgatgctgctggagtcttggaaggagtttgag
caggagtttggctcagacacaaccagggaaagggtgaagaaactgctgccggagaaggtg
aagaagaggagaaagctcacggcagaggacgggtcagatgcagggtgggaggagtactac
gactacatcttccctgaggatgcagcgaaccagcccaacctcaagctgctcgccatggcc
aagatgtggaagaggcagcaacaagaagaagatgatgaagaagacgatgaagaggatgag
gaagaaaacaatggagaagtggataggggtaaagtggaggaagttaggggcaaagaaatg
gagggagaagaaaatggaagaggggagagaggaatagacaaagaaatgacagaagattta
gcatcaccatcatcagaaaagcctatagtcagtgagcctgtgcctgaaaaagtcctcaag
gagagcacatacgatgacagagatgattctgatgaaagcagtagtggaagcagcagcagc
agcagcagcagcagcagtagtagtgacaatgatggtggtgagaaacagccaaggaagagc
aataaggactcagtgaaagattag
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