Oncorhynchus nerka (sockeye salmon): 115108445
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Entry
115108445 CDS
T07952
Name
(RefSeq) replication factor C subunit 4-like isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03030
DNA replication
one03410
Base excision repair
one03420
Nucleotide excision repair
one03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115108445
03410 Base excision repair
115108445
03420 Nucleotide excision repair
115108445
03430 Mismatch repair
115108445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
one03032
]
115108445
03036 Chromosome and associated proteins [BR:
one03036
]
115108445
03400 DNA repair and recombination proteins [BR:
one03400
]
115108445
DNA replication proteins [BR:
one03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115108445
DNA Replication Termination Factors
ELG1-RFC complex
115108445
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115108445
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115108445
Check point factors
HRAD17(Rad24)-RFC complex
115108445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
AAA_22
AAA_assoc_2
AAA_30
AAA_11
Mg_chelatase
DUF815
AAA_24
SLFN-g3_helicase
RuvB_N
AAA_14
AAA_28
AAA_5
Gp44_lid
AAA_19
ResIII
Kinesin
AAA_7
ATPase_2
RPA_interact_N
AAA_3
Motif
Other DBs
NCBI-GeneID:
115108445
NCBI-ProteinID:
XP_029488634
EnsemblRapid:
ENSONEG00000042333
LinkDB
All DBs
Position
LG24:complement(49020193..49027138)
Genome browser
AA seq
355 aa
AA seq
DB search
MQAFLKGTSTQGTRPVKEKGTSGEKKQKSVPWVEKYRPKCMEDVAFQEEVVAVLKKTIEG
ADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKRFAQ
LTVAGHRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSRIIE
PLTSRCSKFRFKPLANQVQEERLLDICDKENLKYSKEGIAALVKVSEGDLRKAITFLQSA
ARLNADNEITESAVVEIAGVVPPKMIDNLLKICYKGTFEKLEIAVRNMVDEGYAATQIIN
QLHEAIIEEELNDKQKSAITEKMAVVDKCLVDGADEYLQMLSMCSVIMQQATLSN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacatcaactcaaggcaccagacctgtgaaagagaaaggt
accagtggagagaagaagcagaaatctgtcccctgggtagagaaatatagaccaaaatgt
atggaagacgtggcgtttcaagaggaggtggttgctgtcctgaagaagactatagagggc
gctgatctccccaatctgctgttctatggaccacctggaacaggaaagacctccaccatc
ctggctgcagccagggaactttatgggccagagctgtaccgacagagagtgctggagctg
aacgcctccgatgagagagggattcaggtggtgagagagaaagtcaagagatttgcccag
ctgactgtagcaggccaccgcactgatgggaaaccatgcccaccctttaagatcatcatc
ctggatgaggctgactcaatgaccaatgctgctcaggctgctctcagacgcaccatggag
aaggagtcccggaccacccgcttctgtctcatctgcaactacgtcagcaggattattgag
cccttgacatccagatgctccaaattccgcttcaaacctctagcaaatcaggtccaagaa
gagcgcctgctggatatctgtgacaaggagaatctcaagtactcaaaggagggtattgca
gcgttggtgaaggtttcagaaggggatcttagaaaagccataacctttcttcaaagtgct
gcacggctgaacgcagataatgagatcacggagagtgcggtcgtagagatagctggggtt
gttcctcccaagatgattgacaatttgctcaaaatctgttacaagggaacatttgaaaaa
ctagagattgctgttcggaacatggtagatgagggctatgctgccacacagatcatcaac
cagctacacgaagccatcatagaggaagagctgaatgacaagcagaagtctgccatcacg
gaaaagatggcagtggtcgacaagtgtttagtggatggtgcagatgagtacctgcagatg
ctgagtatgtgttctgtgatcatgcagcaagccactctgagtaactga
DBGET
integrated database retrieval system
