Oncorhynchus nerka (sockeye salmon): 115109311
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Entry
115109311 CDS
T07952
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03020
RNA polymerase
one03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115109311 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
115109311 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
one03021
]
115109311 (polr2c)
03400 DNA repair and recombination proteins [BR:
one03400
]
115109311 (polr2c)
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115109311 (polr2c)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115109311 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
115109311
NCBI-ProteinID:
XP_029489943
EnsemblRapid:
ENSONEG00000008047
LinkDB
All DBs
Position
LG25:14832588..14837859
Genome browser
AA seq
327 aa
AA seq
DB search
MLKRTRPPRLTNQTIDLFRPISGKQFEAFPVALFRPTRRVNFNVHCFSYTLTMPYANQPI
VKITELTDENVKFVIENTDLSVANSIRRVFMSEVATIAIDWIQIDANSSVIHDEFIAHRV
GLIPLTSDDVVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDLLSNHPRVI
PVTSKSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVSFEYDP
DNALRHTVYPRPEEWPKSEYSEIEEDEVQAPFDPNGKPERFYYNVETCGSLRPETIVMSA
LAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagaacccgcccaccacgactgaccaatcagactattgatttatttcggcca
ataagcggtaagcaatttgaggccttcccggtggcgttgtttagaccgacaagacgtgta
aattttaatgtacattgcttttcttatacgttaaccatgccgtatgctaaccagccaata
gtgaagatcacagaactgacggatgagaatgttaagtttgtcattgagaacaccgacctg
tcggttgcgaattccatccgacgtgtctttatgtcagaagttgcaacaatagctattgat
tggattcaaattgatgcaaattcttctgtgatccacgacgagtttattgctcacagagtg
ggtcttattccccttaccagtgatgatgttgtggacaagatgcagtactccagagactgt
acatgtgacgatttctgcccagaatgctctgttgaactgacactggacgttcgctgcaca
gaggaccagacccgccatgtgacctcacgagacctgctgtccaaccaccctcgagtcatt
cctgtgacctccaagagtcgagacaatgatcccaatgactatgttgaacaggatgacatt
ttgctggtgaagcttaggaagggtcaggagctgcgtctcagagcttatgccaaaaagggt
tttggcaaggagcatgccaagtggaaccctacagcaggggtgtcctttgagtatgaccca
gacaatgcactgaggcacactgtttatccacggccagaggaatggccaaagagtgaatac
tcagagattgaggaggatgaggtgcaagcaccctttgaccccaatggcaaacctgagagg
ttctattacaacgtggagacatgtggctcactgcgaccggagaccatcgtcatgtctgct
ctggcagtgctgaaaaagaaactgagtgatttacagacccagctgagccatgaaatccag
agtgatgtcctcacgatcaactga
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integrated database retrieval system
