Oncorhynchus nerka (sockeye salmon): 115109460
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Entry
115109460 CDS
T07952
Name
(RefSeq) semaphorin-3ab-like
KO
K06840
semaphorin 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
Ig_6
Ig_3
ig
PSI
I-set
Ig_2
V-set
7TM_GPCR_Srb
Motif
Other DBs
NCBI-GeneID:
115109460
NCBI-ProteinID:
XP_029490224
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Position
LG25:23566947..23598674
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AA seq
803 aa
AA seq
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MASLWGTVVLLCGVVALSGAQQKKSNVPRLKLSYKEMLESNNLVTFEGQVNSSAYHTFLL
DEEKGRLVVGAKDHIFSFNLVNISRDMAQIPWPASTSRRDECKWAGKDLMSECSNFIKVL
QPFNQTHLYVCGTGAFHPVCAYLEVGKKLEDSVFRLEPQIENGRGKSPYDPKLLTASVLI
DGELYSGTSADFMGRDFAIFRTLGQHHPIRTEQHDSRWLNDPRFVSVHLIPESDNQEDDK
IYLFFRENAMDGEHAGKATQARIGQLCKNDFGGHRSLVNKWTTFLKARLVCSVPGLNGID
THFDELQDVFLMSSKDPKNPIIYAVFTTSSNIFKGSAVCLYSMADIRRVFLGPYAHRDGP
NYQWVPFQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARGHPAMFNPVYPINNRPII
VKTDTDYQFTQIVVDRVEAEDGQYDVMFIGTDMGTVLKVVSIPRGSWHDLEEILLEEMTV
FREQAAITVMKLSTKQQQLYLGSELGVSQMPLHRCEVYGKACAECCLARDPYCAWDGTEC
SQYFPMTKRRTRRQDIRNGDPLTQCSDLQHQDNLNGQPTVLDKTVYGVENSSTFLECSAK
SQRALTYWQYQQANDDRRRDIKTEDRFVCTEQGLLIRTLDKKDSGMYVCQAVEHGFMQTL
LKVTLEVIDTERLDDLIHRDDEDAAHTATTHTTARDTSTARESPNQKLWYRDFLSLVNHP
TLNSVDEFCEQVWKRERKQRRQKANLSQQVQLHQLHQQQQQGLVHAHTHVHAHGLAAKWK
HLQERQKGRNRRTHELERAPRSV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctctggggcacggtggtgctgctgtgtggggtggtggctctctctggagcc
cagcagaaaaagagcaatgttccccggctaaaactctcttacaaagagatgttggagtct
aataacttggtgacgtttgagggccaggtgaatagctctgcctaccacacgttcctattg
gacgaggagaagggtcgtctggtggtgggagccaaggaccacatattctccttcaaccta
gtcaacatcagcagagatatggcacagatcccgtggcctgcctccacctccagaagagac
gagtgtaaatgggcaggaaaggacctaatgagtgaatgctctaatttcatcaaggtgtta
cagccatttaaccagacccatctgtatgtatgtggaaccggagccttccaccctgtctgt
gcctacctggaggtggggaagaaactagaggacagtgtgttcaggctggagccccagata
gagaacggtcgggggaagagcccttatgaccccaagctgctcacagcatccgtgctcatt
gatggcgaactgtattctgggacgtcagctgacttcatggggagagactttgccattttc
cgtacgctgggacagcatcacccaatcagaacagagcaacacgactctcgctggctgaat
gaccccaggtttgtgagtgtccatctgatcccagagagtgacaaccaagaggatgacaag
atctacctgttcttcagagagaacgctatggatggggaacacgcagggaaggctactcaa
gcacgcatcggacagctctgcaagaatgactttggaggccacaggagtctagtgaacaag
tggaccacgttcctgaaggccagactggtctgttctgtacctggactcaacggcatagac
actcactttgacgaactacaggatgtgtttctgatgagctctaaggatcccaaaaatccc
attatctatgcagtgttcactacatccagtaacatcttcaagggttcagcagtgtgtctg
tacagcatggcagacatcagaagggtgtttctaggtccctatgcccacagagacggccct
aactaccagtgggttcccttccagggacgggtaccatacccacggcccggaacgtgcccc
agcaagacgttcggtggatttgattcgacaaaagacttgcccgatgatgtcataacattt
gccagaggtcacccggcgatgtttaaccccgtctaccccatcaacaaccgaccaatcata
gtcaagacggacacagactaccagttcacacagatagtggtggacagagtggaggctgag
gacggacagtacgacgtcatgttcataggcacagatatggggacagtgctgaaggtggtg
tccatccccagagggtcctggcatgacctggaggagattctactggaggagatgactgtg
ttcagggaacaagctgctattacagtgatgaaactctctacaaagcagcaacagttgtac
ctcggctcagagctgggtgtatcccagatgcctttgcatcgctgtgaggtgtacgggaag
gcctgtgctgagtgctgtctggctagagacccttactgtgcctgggacgggaccgagtgc
tcacaatactttcccatgaccaagaggaggacaaggagacaggacatcaggaacggagac
cctttaacccagtgttcagatctgcagcatcaagataacctgaatgggcagcccacggtg
ctggataagacagtgtatggagtggaaaacagcagtacgttcctagagtgtagcgccaag
tcccagagagcactcacctactggcagtaccaacaagccaacgacgaccgaagacgagac
atcaaaacagaggatcgttttgtatgtacggagcagggcttgctgatccgcacgttggac
aagaaggattctgggatgtatgtgtgccaggcagtagaacacggcttcatgcagacgcta
ctaaaggtcaccctggaggtcatcgacactgaacgcctcgacgatctcattcatcgtgat
gacgaagacgccgcacacaccgctaccacacacaccaccgcccgggacacgtccacagcc
cgggaatcgcccaatcagaagctttggtaccgtgacttcctgtcgttagtgaaccaccca
accctgaatagcgtggatgagttctgtgagcaggtgtggaagagggagaggaagcagagg
aggcagaaagcaaacctatcccaacaggtccagttacaccagctacaccagcagcagcag
cagggcctcgtgcacgctcacacccacgtgcacgcccacggcctggcggccaaatggaaa
cacctgcaggagaggcagaagggccgcaaccgccggacccacgaactggagagagccccc
cgcagcgtctga
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