KEGG   Oncorhynchus nerka (sockeye salmon): 115109517
Entry
115109517         CDS       T07952                                 
Name
(RefSeq) CD44 antigen-like
  KO
K06256  CD44 antigen
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115109517
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115109517
   04090 CD molecules [BR:one04090]
    115109517
   00535 Proteoglycans [BR:one00535]
    115109517
   00536 Glycosaminoglycan binding proteins [BR:one00536]
    115109517
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115109517
  Exosomal proteins of other body fluids (saliva and urine)
   115109517
  Exosomal proteins of colorectal cancer cells
   115109517
  Exosomal proteins of bladder cancer cells
   115109517
CD molecules [BR:one04090]
 Proteins
  115109517
Proteoglycans [BR:one00535]
 Cell surface proteoglycans
  Others
   115109517
Glycosaminoglycan binding proteins [BR:one00536]
 Hyaluronan
  Cell surface receptors
   115109517
SSDB
Motif
Pfam: Xlink Comm CM2 Collectrin
Other DBs
NCBI-GeneID: 115109517
NCBI-ProteinID: XP_029490339
EnsemblRapid: ENSONEG00000016971
LinkDB
Position
LG25:complement(27188743..27226686)
AA seq 429 aa
MWTLLLGVTLGLLASSRSEPAQVKSRSCSHAGVFHVEGPDRYSLTLDLAKKLCESLGITI
ASREQVIEAHAHGLETCRYGWISNGSTTILRQKAHVNCANNTTGVFFHQVSPEKPFDAFC
FNASELADKNCDAAINPDSTGPESVQVTDAADEATGPEDGAQPETTINSEPDTQDTTSAP
GEKGAESTTEVMETLNTDQPAPTEASQVKSTAWAEGYASEGAATESLGIGMTVEGNGTQK
ASPTEHPGVVVTEMEETTVSGMLPSGTDEEGASSMEPSVKEPGEPQGRAREEDLQEKEVE
VGASTQPIPNGKMNPGMGADPTPAGQEISSTPNWLIIVGVLVALVAILLTCFVVVKYKSW
CGQQQTLMISNKDGNEGNGAAASVASSRAQEREQEMVTLMNKEKIQENGNKEEFTAITLE
ESPEKEQLA
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgtggactttgctcttgggggtcaccttaggattactggcctcttccaggtcggaaccg
gctcaagtgaaatctcgtagctgcagccatgccggagtgttccacgtggaaggacccgat
cgctactcattgaccttggacctggccaagaagctgtgtgagagcctgggaatcaccatt
gccagcagggaacaggtcatcgaggctcatgcccatggcctagagacctgcagatatggt
tggatcagcaacggaagcaccaccatcctcagacaaaaggctcatgttaactgtgccaac
aacacgactggggtcttcttccatcaagtctctccggaaaaaccctttgatgccttctgt
ttcaatgcatcagagttggctgacaagaactgtgatgcggccatcaaccctgattcaaca
ggaccagagagtgttcaggtgacagatgctgcagatgaggccacaggccctgaggatgga
gcccagccggagaccaccatcaactccgagcctgacacccaggacaccacctccgcccct
ggagaaaagggagcagagagcaccactgaggtaatggaaacattgaacacagaccagcct
gcacccactgaggccagccaagtaaagtcaacagcatgggctgagggttatgcttcagag
ggggcagccaccgaaagccttggcataggaatgacggttgaggggaatgggacccagaaa
gccagccccactgagcaccctggggtggtggtcactgagatggaagaaaccactgtgtct
ggaatgttgccttctggcacagatgaggagggggcctcttctatggaaccatctgttaaa
gagccaggagaaccacagggccgggccagagaggaggatttacaggagaaggaggtggag
gtaggagcctccacgcagcccattcctaatgggaagatgaatccaggtatgggagcagac
cctactccagctgggcaggagatcagtagcacacccaattggctgatcattgtgggagtg
cttgtggcactggttgctattctcctaacgtgttttgttgtggtcaagtataagagctgg
tgcggtcagcagcagaccctgatgatcagcaacaaggatgggaatgagggtaacggtgcg
gcggcgtcagtggctagctcccgcgcccaggagagagagcaggagatggtgaccctgatg
aataaagagaagatccaggaaaacggaaacaaggaggagttcaccgccatcacactggag
gagtctccagagaaagaacagctagcgtga

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