Oncorhynchus nerka (sockeye salmon): 115114248
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Entry
115114248 CDS
T07952
Name
(RefSeq) ATP-binding cassette sub-family F member 2-like isoform X1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115114248
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115114248
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
AAA_22
RsgA_GTPase
MMR_HSR1
AAA_28
NACHT
AAA_14
AAA_33
VapE-like_dom
Dynamin_N
RNA_helicase
AAA_23
XRCC4_CC
MukB
Motif
Other DBs
NCBI-GeneID:
115114248
NCBI-ProteinID:
XP_029498198
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Position
LG9b:complement(11218071..11229503)
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AA seq
670 aa
AA seq
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MRKLVLKDNSAFHWLVSRHWDTRQRAHSFLCVSNIVAAAGEQEKDRSLSSSLILSRSAAA
MPSDLAKKKAQKKKEAAKSRQKTKKTEDGEGEKPEEGQENGAISNGMESLTKEMDEFELK
KTEARAVTGVLASHPNSTDVHVTSMSLTFHGQELLQDTSLELNSGRRYGLIGLNGTGKSM
LLAAIGHREVPIPEHIDIYHLTREMSPSEKTALQCVMEVDAERIHLEKEAERLASEDSEC
EKLMELYERLEELDADKAEVRASQILHGLGFTASMQQKKLKDFSGGWRMRVALARALFLK
PFMLLLDEPTNHLDLDACVWLEEELSQFKRILVLISHSQDFLNGVCTNIMHLHERKLKYY
TGNYDQYIKTREELEENQMKRFNWEQDQIKHMKNYIARFGHGSAKLARQAQSKEKTLQKM
VASGLTESVKNDQTLSFCFPPCGKIPPPVIMVQNVSFKYSDDQPHIYKNLEFGIDLDTRV
ALVGPNGAGKSTLLKLLMGELLPTDGMIRKNSHVKIGRYHQHLTEQLELDLSPLDYMMKC
YPEIKEREEMRKIIGRYGLTGKQQVNPIRNLSDGQKCRVCFAWLAGQNAHMLFLDEPTNH
LDIETIDALADAINEYEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRDILAYKDHLK
KKIDKNSHGV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagttggtcttgaaagacaactcggcgtttcattggttggtgagccggcattgg
gacacgcgacaacgagctcattctttcttgtgcgtttccaacatcgtcgcagccgcgggt
gaacaggaaaaagaccgctctctgtcttcaagtttaattttgtcgaggtcagcagcagcc
atgccttcagacctggccaagaagaaggcgcagaagaagaaggaagccgccaaatcccgc
cagaagacaaaaaaaactgaggatggagagggagagaaaccagaggaaggccaggagaat
ggagccataagcaatggtatggaaagcctgaccaaggagatggatgagtttgagctgaag
aagactgaggcgcgggcggtgactggcgtgctggcttcgcaccccaacagcacagatgtg
cacgtcaccagcatgtcgctcaccttccatgggcaggagctgctgcaggacaccagcttg
gagctcaactcgggccgccgctacggcctcattggcctcaacggcactggtaaatccatg
ttgctggcagccattggccaccgtgaggtacctatcccagagcacattgacatctaccac
ctgacccgtgagatgtctcccagtgagaagactgccctgcagtgtgtcatggaggtggac
gcggaaaggatccatctggagaaggaggcagagcgcctggcatccgaggactccgagtgt
gagaagctgatggagctttatgagcgcctggaggagctggacgcagataaggctgaggtg
cgggcctcccagatcctccacggcctgggctttaccgcctccatgcagcagaagaagctt
aaggacttcagcggaggctggcggatgcgcgttgctctggccagggccctgttcttgaag
ccgttcatgttgctgctggacgagcccaccaaccacttggacctggatgcctgtgtgtgg
ctggaggaagagcttagccaattcaaacgtattctggtcctgatctcccattcgcaagat
ttcctcaacggcgtgtgcaccaacatcatgcacttgcacgagcgcaagctgaaatactac
acgggcaactacgaccagtacattaagaccagggaggagttagaagagaaccagatgaag
cggttcaattgggagcaggaccagatcaaacacatgaagaactacattgcccggtttggg
cacggctcagccaagctggctcgccaagcccagagtaaagagaagactctgcagaagatg
gtggcctcgggcctgactgagagtgttaagaatgaccaaaccctgtcattttgttttcct
ccctgtgggaagattccccctcctgtcatcatggtccaaaatgtcagcttcaagtactct
gatgaccagccccatatatacaagaaccttgagttcggtatcgacctcgacacccgagtg
gcccttgtggggcccaacggggccgggaagtccaccctgcttaaactcctcatgggagag
ctcctccccactgatggaatgatccgcaagaactcccacgtcaagattggcagatatcac
cagcatctaacagagcagctggaacttgacctctcccccctggattacatgatgaagtgt
tacccagagatcaaggagagggaggagatgaggaagatcattggccgctatgggctgaca
ggcaaacagcaggtgaaccccattagaaacttgtccgacgggcagaagtgccgggtgtgc
tttgcctggctggccgggcagaacgcccacatgctcttcttggacgagcccaccaatcac
ttagatatcgagaccatcgatgccctggctgacgccatcaacgagtacgagggcggcatg
atgctggttagccatgacttccggctcatccaacaggtggcccaggagatctgggtgtgc
gaaaagcaaaccatcaccaaatggaaccgggacatcttggcttacaaagaccatttgaaa
aagaagatcgacaaaaattctcatggtgtatag
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