Oncorhynchus nerka (sockeye salmon): 115114412 Help Entry 115114412         CDS       T07952                                  Name (RefSeq) tenascin-R-like isoform X1   KO K06252   tenascin Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04510   Focal adhesion one04512   ECM-receptor interaction one04518   Integrin signaling Brite KEGG Orthology (KO) [BR:one00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115114412    04518 Integrin signaling     115114412  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115114412  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:one00536]     115114412 Glycosaminoglycan binding proteins [BR:one00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115114412 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin FN3_DSCAM-DSCAML_C Fn3_Dep-1_3rd Pur_ac_phosph_N FN3_Tor_3rd EGF_Tenascin EGF_2 Fn3_Dep-1_2nd Interfer-bind Big_10 Fn3_Dep-1_1st DUF4998 Motif Other DBs NCBI-GeneID:  115114412 NCBI-ProteinID:  XP_029498479 LinkDB All DBs Position LG9b:20053532..20179224 Genome browser AA seq 1371 aa AA seqDB search MAPARGWLLGLALALLLLGSQPAPSLSGEEQKLVRTTRVRRQAPPGGPASPLNNQTVKEQ PMVFNHVYNINVPLESLCSVDLESAAAPPSQASRGAMSSGGGEDPTEFTEQTVDTDSQVT FTHRINIPKQACACPAANSMQQLATRIEMLEREVSLLRVQCSSGNCGCEESSAMGRLDFI PQCSGHGSFNMDLCGCVCEDGWTGKNCSEPRCPDDCSGQGECMEGECVCDRDFGGDNCSE PRCPADCSGRGLCMDGECICEENFTGEDCTLGRCLNDCSDRGLCTNGTCQCRPGYVGEDC SLAYCANNCSQKGICKEGFCACQEGFAGDDCSLVAPDLNLRVRGVTEHTIDLEWEGSVLM TDYLVTYVATSPGGVQLEIRVPGNTTTCSIPDLEPGIEYNINVYAVLNNIISVPANAQVS TYLSNPDGLVFKSITETAVEVQWQPFYYSFDGWEISFIPKDNDGGMTAQLPSTITSFHQT GLRPGEEYTVNLVALRDQGRSQPVSAIVTTLIDGPTQLIVRDVSDTVAFVEWTNPKAKID QIVLRYGLVGTDGPKTTFRLQPTLSQYSLQVLRPGSRYEVSISGVRKGNESGTISTEFST VLLFLSEIDAPKNLQVLSKASTTLELEWDNSEVEVEGYQVVYSTLAGDRYDKVIIPRNDG PTSRTTLTDLLPGTEYGIGISAMLGTNRSSPATMNARTGLDVPMDLTVTASSDNTITLLW GVVQGPIDHYMVTYTSSSGLTMEVTVPNDVTTTTLNDLEPGTEYTITVAAQRGRQQSTAA TIDTFTGFSPVIALYLSDITWDSVTVAWSAPAPPADLYILSYSSEDGTDTSKVTLDGSKT WSSVEGLLPSTQYTVSLITIQGEVTSEAVTATLTTGMDPPKEMTVSYVTEDSVIISWLRP FAPFDYYKMSYQSARGRVDSIVIDNDVTNYTLSSLHPATEYEINLNAVRGSQESKSITTS VFTAMDMPMELTALNITPQGALLQWNPPLSSVDNYVLTLTCNQVTADTFLVEGGKQEHQL TKLLPSTTYSVALYATKGPLTSGTVIANFATPMDAPLNLTASEVNHRSALISWQPPIADI DNYMLTYKSADGSRKELILDAEDTWIRLEGLAEITEYTVRLQAARGLETSDIISTAFTTG NRLFATPQNCAQHLLNGESVSGVYTIYINRDANQGVQVYCDMTTDEGGWIVFQRRQNGLT DFSRKWSDYRVGFGNLEDEFWLGLDNIQKLAAQGRYELRIDMKDGQESVYANYDKFAIGD ARNLYKLRIGEYNGTAGDALIYHQGRPFSTKDRDNDIAVTNCALSYKGAWWYKNCHRANL NGKYGESRHSQGINWHNWKGHEFSIPFVEMKMRPFNYRSISGKRRRSTPPE NT seq 4116 nt NT seq  +upstreamnt  +downstreamnt atggcccctgcacgtggctggctgctgggcctggctctggctttactccttctggggtcc cagcctgctccatccctatccggtgaggagcagaagctggtccggaccaccagggtcaga cgacaggcccctccaggtggccccgccagcccacttaacaaccagacagtgaaggagcag cccatggtcttcaaccatgtgtacaacatcaatgttcccctggagtctctgtgctctgtg gatcttgaatcagcagcggctccacccagtcaggcttccaggggagcaatgtccagtggg ggtggggaggacccaacagagttcacagagcagacagtggacacagacagccaggtcacc ttcacccaccgcatcaacatccccaaacaggcatgcgcctgtcccgcagccaacagcatg cagcagctggccacccgcatcgagatgctggagagagaggtgtcgctgctcagagttcag tgcagctctggcaactgtggctgtgaggagagttcagccatgggtcgccttgacttcatc ccccagtgcagtggtcacggcagcttcaacatggacctgtgtggctgtgtgtgtgaggac ggctggacgggcaagaactgctctgagccacgctgcccagacgactgctccggacaggga gagtgtatggagggcgagtgtgtctgtgaccgcgacttcggaggggacaactgctcggag ccccgctgccctgcggactgctccggtcgagggctgtgcatggacggggagtgtatatgt gaggagaatttcactggagaggactgtacgcttggtcgctgcctcaatgactgctctgac cggggcctgtgcaccaatgggacctgccagtgtcgcccgggatatgtgggagaagactgc tctctggcctactgcgccaacaactgtagtcagaagggcatctgtaaggagggcttctgt gcctgccaagagggcttcgctggagacgactgctctttagtggctccggatctgaatctg cgtgtgcggggagtgacagagcataccattgacctggagtgggaggggtcggtgttgatg acagactacctagtcacctacgtggccaccagcccaggtggggtccagctggagatcagg gtccctgggaacaccaccacctgcagtattccagacctggagcctggcatcgagtacaac atcaacgtctacgctgtgctcaacaacatcatcagtgttcctgccaatgctcaggtgtca acctatctctcaaatccagacggtttagtcttcaaatccatcacagagacggccgtggag gtgcagtggcaaccgttctactactcgtttgatggctgggaaataagcttcattccgaag gacaatgatggagggatgacagcccagctgcccagcaccattacttcattccaccagaca ggcctgagaccaggggaggagtacaccgtcaacctggtagctctcagggaccagggccgc agccagcccgtatccgccatcgtcaccacgttgattgatgggccgactcagctaatagtg cgtgacgtctcggacacggtggccttcgtggagtggaccaatcccaaggctaagatcgac cagatagtactgcgttatggcctggtggggacggacgggcctaagaccaccttccgtctg cagcccaccctcagccagtactccctgcaggtgctgagaccaggctcgcgttacgaggtg tccatcagtggtgttcgcaagggcaatgagagtggaaccatctccacagaattcagtacc gttctgttgttcctctcagagatcgacgcacccaagaacctgcaggtgctgtccaaggcc tccaccaccctggagctggaatgggacaacagcgaggtggaagtagaggggtaccaggtg gtctacagcaccctggcaggggaccggtatgataaggtcatcattccacgcaacgatgga cccaccagcagaaccacactcactgacttgttgccaggtacagagtatggcattggtatt tcggccatgcttggcaccaaccggagttctcctgccacaatgaacgccagaactggtcta gacgtccccatggacctgactgtgacagcgtcctcagacaacaccatcaccctgctgtgg ggggtggtccaggggcctatcgaccactacatggtcacctacacctcctcatctggactg accatggaggttactgtccccaatgacgtgaccaccaccactctcaatgacctggagcca ggcacagaatacaccatcactgtagctgcccagagaggcaggcagcagagcactgcagcc accatcgataccttcacaggcttcagccctgtcattgctctctacttgtctgacatcacg tgggactcggtgacggtggcatggagcgccccggccccacccgcagacctctacatcctc agctacagctctgaggacggcactgacacctccaaggtcaccctggatggatccaagacc tggtcctctgtggagggtctcctgccctccacacagtacacagtcagccttatcaccata cagggagaggtgacgtctgaagctgtcacagccacgctcaccacaggaatggacccacct aaagagatgactgtgtcatatgtcactgaagactctgtcatcatatcatggttgagacct tttgccccctttgactattacaagatgtcctaccaatcagcaagagggcgagtggacagc atcgtgattgacaacgacgtgaccaactacaccctgtccagcctccacccggcaacagag tatgagataaacctgaacgccgtgaggggaagccaggaaagcaagtccatcaccaccagt gtcttcacagcgatggacatgccaatggaactgacagccctcaacattaccccacaagga gctttactgcagtggaaccctcctctgtccagcgttgacaactacgtgctcaccctcacc tgcaaccaggtgacagctgacaccttcctggtggagggtgggaaacaggagcaccagctc actaagctcttgcctagcaccacttactctgtagccctctatgctaccaagggacccctg accagtggaacagtcatcgccaactttgcaacacccatggacgctcctttgaacctgacc gccagtgaggtgaaccaccgcagtgccctcatctcctggcaaccgcccatcgcagacata gacaactacatgcttacatacaaatcagccgatggcagcagaaaggagctgatcctggat gcagaagacacgtggatccgtctggagggcctggcagagatcacagaatacactgtgagg ttgcaggctgccagaggattagagaccagcgatatcatctctacagccttcacaacagga aaccgtctgtttgccacccctcagaactgtgcccagcatctgctgaacggggagtctgtg agcggtgtctacaccatttacatcaacagagacgccaatcagggagtgcaggtctactgt gatatgaccacagacgaaggaggctggatcgtgttccaacgtcgtcagaatggccttacc gacttttccaggaagtggagtgactacagggtcggctttgggaacctagaggatgaattc tggctcggtttggacaacatacagaagcttgcagctcaaggtcgctacgagctccggatc gacatgaaggatggccaggagtctgtctatgccaactatgacaaattcgccatcggtgat gccaggaatttatacaaactcaggataggagagtataatggcacagctggggatgcactg atctatcaccaaggccgtcccttctccaccaaggacagagacaatgacattgctgtgaca aactgtgctctgtcctacaaaggagcctggtggtacaaaaactgccatcgggccaacctg aatggaaaatatggcgagtcgagacacagtcagggtatcaactggcataactggaagggt catgagttctctatcccattcgtagagatgaagatgaggccatttaactaccgcagcatc agtggcaagcgaaggaggtccactcctccagaataa

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