Oncorhynchus nerka (sockeye salmon): 115114505
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Entry
115114505 CDS
T07952
Name
(RefSeq) protein SSXT-like isoform X1
KO
K15623
protein SSXT
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115114505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115114505
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115114505
GBAF(ncBAF) complex
115114505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
115114505
NCBI-ProteinID:
XP_029498648
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All DBs
Position
LG9b:complement(25151147..25167196)
Genome browser
AA seq
427 aa
AA seq
DB search
MSVAFAPHRQRGKGDITPTGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAKCDSPTPPEVKLEPPTQNMPMGPGGMNQSGVPGPQPPHGHNMP
SEGMVSGGPPAPHMQSQMNGQMPGPNHMPMQGPGPGPNQPPNMPGSGSMNMPPSSHGSMG
GYNHAVPSSQSMPAQGQMNMTQGPMGNYGPRPNMNMQANQGPMMHQQPPSQQYNIPPGGG
GQHYQGQQNPMGMMGQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASE
ERDPAANQQSPYEKDNERDPAANQQSPYEKDHGNAQYGQQQEAYQQGPPQQQGYPPQQQY
PGQQGYPGPQQGYGPSQGAPGQYPQGYPQGQGQQYGAYRGPQPGPPQAQQQRPYPGYDQG
QYGNYQQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcatagacaacgtggaaagggtgatataacacccactgga
attcagaagttactggatgaaaacaatcagttgattcaatgtataatggacttccagagc
aaaggaaagacagcagaatgttcacagtaccagcagatgctccacagaaatttagtttac
ctggccacaatagcagactccaatcagaacatgcagtctctgctccctgctaagtgtgac
tcccctactcccccagaggtaaagcttgaacctcctactcagaacatgcccatgggccct
ggtgggatgaaccagagcggagtgccgggcccccagcccccccacggacacaacatgccc
tctgagggcatggtcagtggcggacccccagccccacacatgcagagccagatgaacgga
cagatgcctgggcctaatcacatgcccatgcagggccctgggccgggtcccaaccagccc
cccaacatgcccggcagcggctccatgaacatgccccccagcagccatggctctatgggc
ggctacaaccacgctgtaccctcctctcagagcatgcctgcccaaggccagatgaacatg
acccaaggacccatgggtaactacggcccccggcccaacatgaacatgcaggctaaccaa
ggccccatgatgcaccagcagcctccctcccagcagtacaacataccccctggaggtggc
gggcagcactaccagggccagcagaaccccatgggcatgatgggccaggggaaccacgtg
atggggcagaggcccatgcccccttacagacccccacagcaaggaccccctcagcagtac
ccagggcaggaagactactatggggaccagtacagtcacgcaggacagggagcctcagaa
gagcgagacccagcagccaaccaacagtccccctatgaaaaagataatgagcgagaccca
gcagccaaccaacagtccccatatgaaaaagatcatggtaatgcccagtatggccagcag
caggaggcctaccagcaaggtcctccccagcagcagggctaccccccacagcagcagtac
cctggacagcagggctaccctggaccgcaacagggctatggtccgtcccagggagcccca
ggccagtacccccagggttacccccagggccaggggcagcagtacggggcctaccggggc
ccccagcccggcccccctcaggcccagcagcaacgcccatacccaggctacgatcagggt
caatatggaaattaccagcaatga
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