Oncorhynchus nerka (sockeye salmon): 115117104
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Entry
115117104 CDS
T07952
Name
(RefSeq) talin-1-like
KO
K06271
talin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115117104
09142 Cell motility
04820 Cytoskeleton in muscle cells
115117104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115117104
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115117104
Exosomal proteins of other cancer cells
115117104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
Talin_VBS2
Talin_middle
Talin_R4
FERM_f0
IRS
FERM_M
TLN1-like_RS
I_LWEQ
FERM_N
RA_2
DUF7783
ACBP
PH_SLA1
TrcR
SNX17-31_F2_FERM
VBS
GIT1_C
Vinculin
Motif
Other DBs
NCBI-GeneID:
115117104
NCBI-ProteinID:
XP_029501430
LinkDB
All DBs
Position
LG4:complement(2712462..2820890)
Genome browser
AA seq
1502 aa
AA seq
DB search
MVALSLKIGVGNVVKTMQFEPSTMVYDACRMIRERVPEAQLGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVSDMLMTICARIG
ITNYDEYSLVHDMVEEKKEEMTGTLTRRDKTLMRDDKKMEKLKQKLHTDDELNWLDHGRT
LREQGVEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACDFA
GYQCQIQFGDHNETKHKPGFLDLKEFLPKEYIKNQGEKRIFQAHKNYQNMTEIEAKVSYV
KLARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKECVMRVDEKTKEVIQEWNLTNIKRW
AASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTM
LEDSVSPKKSTVLQQQFNKVGKVETGSVALPAIMRSGAGGPESFQMGSMPQAKQHITSGQ
MHRGHMPPLTSAQQALTGTINSSMQALQAAQASLEEFDTLPPLGTDAASQAWRKNKMDES
KHEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALME
DEGGNGNQLLGAAKNLACAVSDMLKTAQPANTEPRQNLLQAAGNVGQASGELLSHIGETD
ADPRFQFLGKGSFRGARRSVSTYSHMLDMLMQLAKAVANAAAALVLKAKNVAQKTEDSAL
QNRVIAAATQCALSTSQLVACTRVVAPTISSPVCQEQLIEAGKLVAKSVDGCVDASQGAT
SDEGLLKQVGAAASGVTHALNELLQHIKQYAHGGQPIGRHGEATDRILDVTENIFSSMGD
AGEMVRQARILAQATSDLVNAIKMDAEGESDLENSRKLLSAAKLLADATAKMVEAAKGAA
ANPDSEEQQQRLREAAEGLRMATNAAAQNAIKKRLVNKLENAAKQAAAAATQTIAAAQHA
ASSNKNPAAQQQLVQSCKVVADQIPQLVQGVRGSQSQPDSPSAQLTLIGAGQNFLLPGAK
MVTAAKATVPTIGDQASAMQLSQCAKNLATALAELRTAAQKAQEACGPLEIDNALTVVRG
LEKDMVEAKASAGDGKLKPLPGETLEKCSQDVGNSTKAVSSAIAQLLSEATQGNENYTGM
AARDVAQALRALASAARGVAATTADPQARNAMLDCAGDVMDKSANLIEETKRAIAKPGDP
DSQQRLAQVAKAVSQALNRSVNCLPGQRDVDNAIRTVGEASKKLLANSFPPSGKSFQEAQ
VNLNQAAAGLNQSANELVQSSRGTTQDLAKATGKFGHDFGEFLDAGVDMAGQSQNKENQT
QVVSNLKTISMSSSKLLLAAKVLSTDPNSPNLKNQLAAAARAVTDSINQLITMCTQQAPG
QKECDNALRELETVRGMLENPTEAVSDLSYFDCIDSVMENSKVLGEAMAGISHNAKNSNL
PEFGDSVSSGSKALCGLTEAAAQVNHLPVQQTRGRPKWPSIPYVFLTQPQLESDVYEAHS
VT
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggtggccctgtcactgaagattggcgtggggaacgtggtgaagaccatgcagtttgag
ccctccaccatggtgtacgacgcctgtcgaatgatcagggaaagagttcccgaggcacag
ctgggccagcccaatgactatggtctgttcctgtccgatgaggaccccaagaaaggcatc
tggctggaggcaggcaaggccctggactactacatgctgaggaatggggacactctggag
tacaaaaagaagcagaggcccttgaagatccgcatgctggacgggacagtgaaaaccgtc
atggtggacgactccaagatcgtcagcgacatgcttatgaccatctgtgccaggataggt
atcacaaactatgacgagtactcgttggtgcacgacatggttgaggagaagaaggaggag
atgacggggactctgacaagacgggacaagactctgatgagagacgacaagaagatggag
aaacttaagcagaaactccacacagatgacgagttgaactggctggaccatgggcggacg
ctgagggagcagggtgtggaggagaccgagatgctgctcctcaggaggaagttcttctac
tcagaccagaacgtggactcacgagacccggtccagctcaacctgctctacgtccaggcc
cgtgatgacattttgaacggctcccatcccgtctccttcgagaaggcctgcgactttgcc
ggataccagtgtcagatccagtttggtgaccacaacgagaccaagcacaaaccaggcttt
ctagatttgaaagagttcctccctaaagagtacatcaagaaccaaggggagaaaagaatc
ttccaggcacacaaaaactaccaaaacatgactgaaattgaggccaaagtcagctacgtc
aaactggctaggtctctgaaaacctacggagtgtcattcttcctagtaaaggagaaaatg
aagggtaagaacaagctggtccctcgtctgctgggaatcaccaaggagtgtgtcatgcgg
gtagacgagaagaccaaggaggtgatccaggagtggaatctcaccaacatcaaacgctgg
gctgcctcgcccaagagcttcaccctggactttggcgattatcaagacggttactactct
gtccagacgactgagggagagcagatcgcccaactgatcgctggttacattgacatcatt
ctgaaaaagaaaaagagcaaggaccactttggcttagagggagatgaggagtccaccatg
ttggaggattctgtgtcacccaaaaagtctacagtgctgcagcagcagttcaacaaggtg
gggaaggtggagactggctctgtggccctgccagccatcatgcgttcaggggccgggggc
cccgagagcttccagatgggctccatgcctcaggccaagcagcacatcaccagcggacag
atgcacaggggccacatgcccccgctgacgtcagcccagcaggccctgactggcaccatc
aactccagcatgcaggcgttgcaggctgcccaggcctcgctggaggagtttgacaccctg
cctcccctcgggacagacgcggcctcccaagcctggcgtaagaacaagatggacgagtcc
aaacacgagatccactcccaggttgacgccatcacagccgggacggcctctatggtcaat
ctcaccgcaggcgacccagcagagacagactacactgcggtgggctgtgccgtgaccacc
atctcctccaacctaacggagatgtccaagggggtcaagctgctcgccgccctcatggag
gatgagggaggcaacggaaaccagttgttgggggctgccaagaacctggcgtgtgccgtg
tccgacatgctaaagaccgcccagccagccaacactgagccccgtcagaaccttctgcag
gctgcaggcaacgtgggccaggccagtggcgagctgctgtctcacatcggagagacggac
gccgacccccgctttcagtttctaggtaaaggatctttcaggggtgcaaggcggagcgtc
tccacttatagtcacatgctggacatgcttatgcagctggctaaagccgtggctaacgcc
gccgccgctctggtgctcaaagcaaagaacgtggcccagaagacagaggactctgcactc
cagaaccgcgtcatcgccgcagcgacccaatgtgccctatccacctcccaactggtggct
tgcacccgggtggtcgctcccaccatcagctctccggtgtgccaggagcagctgattgag
gcaggcaagctggttgccaaatcggtggatggctgcgtggatgcgtcgcagggcgccacc
agcgacgaggggctcctcaagcaggtgggcgccgccgcctcaggcgtcacccacgccctc
aacgagctcctgcagcacatcaagcagtacgcccacggaggccagcccatagggcgccac
ggagaggccaccgaccgcatcctggacgtcaccgagaacatcttcagctccatgggagat
gccggtgagatggtgcgtcaggcccgcatccttgcccaggccacctcggacctggtcaac
gccatcaagatggacgcagagggcgagtcggacctggagaattcccgcaagctgctgtca
gccgccaagctcctggcagacgccacggccaaaatggtggaggctgccaagggcgcagcc
gccaacccggacagtgaggagcagcaacagagactgagggaggcagcagagggcctacgc
atggccaccaacgcggctgcccagaatgccatcaagaagaggctggtcaacaagctggag
aacgcagccaagcaggccgccgcggccgccactcagactatagccgccgcccaacacgcc
gcctcgtccaataagaacccagcagcccagcagcagctcgtccagagctgcaaggtggtg
gcagaccagattcctcagctggtccagggagtgcgtggaagccagtcccagcccgacagc
cccagtgcccagctcaccctcatcggggccggccagaacttcctcctgcctggtgccaag
atggtgacggctgccaaggccacagtacctaccattggcgaccaggcctctgccatgcaa
cttagccagtgtgccaagaacctggccactgcccttgccgagctccgcacggccgcacag
aaggcacaggaagcatgtggtcctctggagatcgacaatgctctgacggtggtccgaggc
ctggagaaagacatggtggaggccaaggcttcagctggtgatggcaaactcaaacccctg
cccggagagacgctggagaagtgctctcaggacgtgggcaacagcactaaggctgtgagc
tctgccatcgcccagctgctgagtgaggccacccagggcaacgagaactacacaggtatg
gcagccagagacgtggctcaggcattgcgcgctctggcctcggccgcccgtggggttgcc
gcgacgaccgccgaccctcaggcccgcaacgccatgctggactgcgctggtgacgttatg
gacaagtcggccaatctgatcgaagagaccaagagagccattgccaagccgggagatcct
gacagccagcagagactggcacaggtggccaaggctgtatcccaggccctgaacaggagt
gtgaactgcctgcctggacagagagatgtggacaacgctataagaacagtcggagaggcc
agtaagaaactactggccaattctttcccgcccagtgggaagagtttccaggaggcgcag
gtcaacctgaaccaggctgcagccggtctcaaccagtcagccaatgagctggtccagtcg
tccaggggcaccacccaggacctggccaaggccactggcaagttcggccatgacttcgga
gagttcctggatgccggcgtggacatggccggccagtcacagaacaaggagaaccagacg
caggtggtgtccaacctcaagaccatctccatgtcgtccagtaagctgctgctcgccgcc
aaggtcctgtccacagaccccaactcacccaacctcaagaaccaactagcagccgccgct
cgtgccgtcactgacagtatcaaccagctcatcaccatgtgtacccagcaggccccgggc
cagaaggagtgtgacaatgctctccgggagctcgagactgttcggggtatgcttgagaac
cccaccgaggcggtcagtgacctctcctactttgactgcatcgacagtgtcatggagaac
tccaaggtcctgggggaagccatggctggaatctcccacaacgctaagaacagcaatctg
cctgagtttggggactctgtcagctctggctctaaagccttgtgtggccttactgaagca
gctgcccaggtaaaccaccttccagtccagcagaccagggggcgtcccaaatggccctct
attccctatgtcttcctcacacagcctcagctggagagtgacgtttacgaggctcactct
gttacatag
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integrated database retrieval system
