Oncorhynchus nerka (sockeye salmon): 115120413
Help
Entry
115120413 CDS
T07952
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115120413
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115120413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_5
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
115120413
NCBI-ProteinID:
XP_029505211
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MVEGFSLCFCLALLCLGRCVCSTCPFQCSCFFHKLSAGSKARSVLCNDPEITLIPPNFPT
DTSKLRIEKTAITRISSETFHYLNSLELLCISFNSLHSLNVDSFRGLRSLDELRLEGNAL
TSFPWESLTDMPDLRLLDLHNNKISSIPAEAATYIKNLTYLDLSSNSLVTVPPEVLSTWL
SVKPSQGDGESSKYILGLHDNPWLCDCRLYDVIQFQKSPSTSVTLIDTRLHCADPESLSG
VSFSETELRKCQEPRVHTAVARVRSSLGNNVLLRCGTIGVPVPELSWTRADGKQMNGTVQ
GEVSKEGIIWSMLSVRAVSYRDSGKYICKATNFVGTADAIISLVITDSFKNEEQGSSSKT
RKQRGRKTGGFGKAAYQDKLVAKYIPPPTTTAATPIIEPPTTTAATPIIESLGPGGFTGQ
YDIESYDISNSVVDGQTPGPPITETAMQEVEKEVLSNLAANASSLQAPAPPEKRVVRSVK
IIGDTDHTVSLNWRAPVAKNTTEFSVLYAVFGERDMRRINVAAGKNRITIDGLVPRTKYI
ACVCVKGLIPKKEQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKKR
CKKLLGRKSKDIQESYVTFETLSPGQNPKGMEGEYLARQQPDESNRLLSARCSVDSEAIC
RTEGPPNEYFC
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaggttttagtctgtgtttctgcttggcattactttgcctcggacggtgtgta
tgcagcacgtgtccgtttcaatgtagctgtttctttcacaaactatcggccggatccaaa
gcaaggagtgtcctttgcaatgacccagagatcactctgatcccacccaactttcctaca
gacacctcaaaactgcggatcgagaagactgccatcacaaggatctccagcgaaactttt
cactacctcaacagtttggaattgctctgcatttctttcaactctctgcactctttgaat
gtagacagcttccgtggcctgagaagtctggatgagctgagactggaagggaacgctctc
acctctttcccctgggaatctctgactgatatgcccgacctgaggctactggacttgcat
aataataagatatcgtcgatcccggccgaggcggccacctatatcaagaacctgacctac
ctggacttatctagcaacagcctagtcacggttcctcctgaggttctctctacctggtta
tctgtgaaaccatctcaaggagatggggaaagttccaaatatattctaggtctccatgac
aacccgtggctgtgcgactgccggctctatgacgtgatccagttccagaagtctccatcc
acatccgtgactctgatcgacaccaggctgcactgcgcggacccagagagcctgtcgggg
gtgtcgttcagcgagacggagctccggaagtgccaggagccccgtgtccacacggctgtg
gcccgggtcaggagctccctggggaacaacgtcctgctgcgctgtgggacaatcggagtc
ccagtaccagagctgtcctggacccgggcagacggcaaacagatgaacggcactgttcag
ggagaagtttcaaaggagggaatcatttggtccatgctgagtgttcgtgctgtctcttac
agggactctgggaaatacatctgcaaagcgaccaacttcgtggggactgcagatgccatc
atctccctagttatcacagactccttcaaaaatgaggaacaaggtagcagctccaagact
agaaaacaaaggggacggaaaaccggtgggtttgggaaagctgcctaccaggataaactt
gttgcaaaatacatacctccaccaaccaccacggcagccacgcctatcatcgaaccacca
accaccacggcagccacgcctatcatcgaatcactaggaccgggcggttttacaggacag
tatgatatcgagagctacgatatctccaacagcgtggttgacggacagacgcccggtcct
cccatcacggagacggcgatgcaggaagtggagaaggaggtccttagcaacctagcagcc
aacgcctcttctttacaggcgccggcaccaccggagaaacgggtggtgcgttcggtgaag
ataatcggggacaccgaccacaccgtctccctgaactggcgggccccggtggccaagaac
accaccgagttcagcgtcctgtacgccgtgttcggcgagagggacatgcggaggatcaac
gttgctgcgggaaagaaccgtatcaccatcgacggccttgtgccaaggacaaagtacatc
gcctgcgtctgcgtcaaaggcctgatccctaaaaaggagcagtgtgtaatcttctcaacg
gacgaggcggccagcgcaagcggcacccagaagctcattaacgtggtggtgatcaccgtg
gcctgcgtgatcgctgtccccctgacactgatcgtctgctgcggggcgctcaagaagcgc
tgcaaaaagctactggggagaaaatccaaagatatccaagaatcatatgtgacattcgag
accctatccccaggacagaaccctaaggggatggagggggagtaccttgccaggcaacag
ccagacgagtccaacagactgctctctgctaggtgcagtgtggactccgaggccatttgt
aggactgagggaccgcctaacgagtacttttgttga
DBGET
integrated database retrieval system
