Oncorhynchus nerka (sockeye salmon): 115121900
Help
Entry
115121900 CDS
T07952
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115121900 (gtpbp3)
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
115121900 (gtpbp3)
Prokaryotic type
Methyltransferases
115121900 (gtpbp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
RsgA_GTPase
FeoB_N
Dynamin_N
cobW
DO-GTPase2
FtsK_SpoIIIE
ABC_tran
SRPRB
Guanylate_kin
Motif
Other DBs
NCBI-GeneID:
115121900
NCBI-ProteinID:
XP_029506902
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MLPCSWGLWRSAIHTLKTFSRASPSARGLCIPTRAVCDAETIFALSSGHGRCGVAVVRVS
GPASSMVLRNMAGLTQALPPPRTALLRRITDPQSKELLDRGLVLWFKGPHSFTGEDSAEF
HIHGGPAVITAVLQALGSLEGVRPAEAGEFTRRAFHAGKLGLTEVEGLGDLIHAETEAQR
RQALRQMDGELGRLYQDWSYRLKRCLAHVEAFIDFSEDELIEDGVLNQVDSSVRQLETEI
ERHLKDERRGERLRTGVQVVIAGATNAGKSSLLNTLCQRPAAIVSPIAGTTRDIVETSLD
IGGFPVLLSDTAGLRDSSDSVEREGVRRARQRVEQADLTLVVVDSTQLPPDPQVVAAFLQ
EHLSTVLPSPEAGMKAASDRVLLVLNKSDLVPEGQRERTEGELRERPGLPPACFLSCSTS
TGLEDFLTVLQSRVKTLCGDPLSGAPSLTQARHRAHLQQSVQALNQYHQYRDQDLALAAE
GVRLALTHLGRITGRVGAEEILDIIFRDFCIGK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgttgccatgctcttggggattgtggagaagcgctattcacaccctcaagacattcagc
agagcatctccatcagcgaggggcctgtgtatcccgaccagagcggtatgcgatgctgag
accatctttgccctgtcgtcaggccacggcaggtgtggtgtggcggtggtccgtgtcagt
ggtcctgcctcctccatggttctgagaaacatggcaggtctgacccaggctctaccccct
cctcgtaccgccctgctacggaggatcactgacccccagtccaaagagctgctggaccga
ggactggtcctctggttcaaaggtccccacagcttcacaggggaagacagtgcagagttt
catattcacggaggtcctgcagtcatcacagctgtcttacaagccctaggaagcctggag
ggtgtgaggcctgcggaggcaggggagttcacgcggagggccttccacgcggggaaactg
ggcttgacggaggtggagggcctgggggacctgatccacgctgagactgaggcccagagg
aggcaggccctcaggcagatggatggggagctgggtcgcctctaccaggactggagttac
aggctcaaacggtgtttggctcacgtggaagccttcatagacttcagtgaagatgagctc
atcgaggacggggtgttaaatcaagtggacagttcagtgcgccagctggagacagagata
gagagacacctaaaggacgagaggagaggagagcggctgcgcaccggagtacaggtggtg
atagcaggagctaccaatgctgggaagagcagtctgctcaacacgctctgccagcgtcca
gcagccatcgtgtcccccatcgcgggcaccaccagggacattgtggaaacctctctggac
attgggggcttccctgtcctcctgagtgacaccgcagggctcagagactcctcggacagc
gtggagagagagggggtccgtagagcccgccagagggtggagcaggctgatctgacccta
gtagtggtggactccacccagctacccccagaccctcaggtagtagcagccttcctccag
gagcacctcagcactgtgctgcccagccctgaggccggcatgaaggctgcctcagacagg
gtcctgctggtgctcaacaagagtgatctggtacctgaggggcagagggaaagaacagag
ggagagctgagagagagaccgggtctccctcctgcatgttttctgtcctgctctaccagt
acaggactggaggatttcctcactgtgctgcagagcagggtcaagactctgtgtggtgac
cctctgagcggagctcccagtctgacccaggcccgtcacagagcccacctccagcagagt
gtccaggccctgaaccagtaccaccagtacagagaccaagacctggccctggccgcagag
ggggtccgcctcgccctcacccacctgggacgcattacaggacgggtcggagccgaggag
atcctggacatcatattcagagacttctgtatagggaaataa
DBGET
integrated database retrieval system
