KEGG   Oncorhynchus nerka (sockeye salmon): 115127794
Entry
115127794         CDS       T07952                                 
Name
(RefSeq) ras-related protein Rab-40C
  KO
K07928  Ras-related protein Rab-40
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115127794
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:one04031]
    115127794
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul5 complex
    Target recognizing subunit
     115127794
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab40
    115127794
SSDB
Motif
Pfam: Ras Roc SOCS_box Arf
Other DBs
NCBI-GeneID: 115127794
NCBI-ProteinID: XP_029513270
EnsemblRapid: ENSONEG00000025619
LinkDB
Position
Unknown
AA seq 293 aa
MRGMMATQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYPYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAYKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVATNAAGGGVSGNNNSSKGNSLKRSKSFKPPSSPPKTSSSKSNCNIT
NT seq 882 nt   +upstreamnt  +downstreamnt
atgcgtgggatgatggctacacagggcagccctgtcaagagttacgactacctcctgaag
ttcttgctggttggagacagtgatgtggggaaaggagagatcctagacagtctgcaggac
ggatcagcagagtctccctatccctacagcagtgggattgactacaagactaccacaatc
ctgttggatgggagaagagtcaagttagagttgtgggatacgtctggacagggtcgattc
tgcacaatcttccggtcatattcacgtggggcacagggaatcctgctagtttatgatatc
acaaatggctggtcgtttgatggcattgaccgctggatccgggagatcgatgagcatgcc
ccgggggtgccccgcatcctagtaggcaaccggctccacctggcctataagagacaggtg
cccacggagcaggcccgcgcctacgccgagaagaacggcatgaccttctttgaggtcagc
cctctgtgcaacttcaacgtcatcgagtcgttcacggagctgtcgcgcatcgtgctgatg
aggcacggcatggagaagttctggagaccaaaccgagtgttcagcctccaggacctgtgt
tgccgctccatcgtctcatgcacccccgtccacctcattgacaagctgcctctccccgtg
gccatcaagtcccacctcaagtccttctccatggccaacggaatgaatgctgtcatgatg
catggacgctcctactccgtggccaccaatgcggcgggcggcggcgtgagcggcaacaac
aacagcagcaagggaaacagtctcaaacgctccaagtcctttaaaccgccgtcgagcccc
cccaagactagtagcagcaaaagtaactgtaacatcacctag

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