KEGG   Oncorhynchus nerka (sockeye salmon): 115128236
Entry
115128236         CDS       T07952                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    115128236 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115128236 (exosc7)
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     115128236 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     115128236 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 115128236
NCBI-ProteinID: XP_029513774
EnsemblRapid: ENSONEG00000021134
LinkDB
Position
LG4:39386375..39396012
AA seq 291 aa
MATVQVSEAEKVYILHGVRDDLRVDGRGCEDYRHMEIETDMVSNTDGSAKVTLGHTDVLV
GVKAEMGKPRPMVPDEGYLEFFVDCSANATPEFEGRGGDELGMELSNTLYKVFNNRYSVD
LKSLCISPGEHCWVLYVDVLLLQCDGNLFDAISVAIKAALFNTKIPKVHISEDEEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCVR
KVGGGSLDPESIFEMTETGKRVGKALHAPLMELLQEEESLGKKRQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggctactgtacaagtcagtgaggctgaaaaggtgtatattttgcatggtgtacgggat
gacttacgggttgatggacgaggatgcgaggactacagacacatggagattgagacagac
atggtgtcaaatacagatggctcagccaaagtgacactggggcatacagatgtgctagtg
ggagtcaaagctgaaatgggaaagccaaggcccatggtcccagatgaaggctacctggag
ttttttgttgattgctctgccaatgccacaccagaatttgagggtcggggtggtgatgag
ctgggcatggagttgagcaacaccctgtacaaagtgttcaacaacagatacagtgtggac
ctgaaaagcctctgcatcagcccaggggaacactgctgggtgctctatgtggacgtgctg
ctcctgcagtgtgatggaaatctttttgatgccatctctgttgcaattaaagcagctctc
ttcaatacaaaaattcccaaagtgcacatctctgaggatgaggaaggagggaaggaaata
gagctgtcagatgacccctacgactgcatgcgactcaatgtggagaacgttccctgcatc
gtgaccttgtgcaaggtgggtcataggcacgtagtggacgccacgctgcaggagaaggcg
tgttcagtggccagcctgatcatctccgtcacacacaaggggacggtcacctgtgtcagg
aaggtgggcgggggcagcctggacccagagagcatctttgagatgaccgagacagggaaa
cgggtagggaaagccctccacgcccccctcatggagcttctgcaggaggaggagagtctg
ggaaagaagagacagaaagtgggctttcttggttag

DBGET integrated database retrieval system