Oncorhynchus nerka (sockeye salmon): 115131158
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Entry
115131158 CDS
T07952
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115131158
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
115131158
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
MS_C
DUF7645
Motif
Other DBs
NCBI-GeneID:
115131158
NCBI-ProteinID:
XP_029518613
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Position
LG6:37011632..37014438
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AA seq
271 aa
AA seq
DB search
MHVGYLLDKEGSMYHQGPVRRSGINIPPQNFVPTPQYSDFTGYHHVPNMDTHAQSSGAWG
APYGAPREDWGAYSLGPPNTIPTPMNNSSPGQVSYCSPEYNPMHPPGSAVLQPPPDNISV
AQLSPERERRNSSYQWMNKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIR
RKSELAGNLGLSERQVKIWFQNRRAKERKLIKKKMGSDGSGGSVHSDPGSVSPLPVPGSL
SPSDIHGSLYPPPGMNTLASIRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgggataccttttggataaagaaggcagcatgtatcaccaaggacctgtaaga
cgatcgggcatcaacatcccaccacagaactttgttcccacgccacaatattccgacttt
actggataccatcatgtgccaaacatggatacgcacgcacagtcttcgggggcttgggga
gctccttatggcgcaccgagagaggactggggcgcctatagtctgggtcctcctaacact
attcctacgcccatgaacaactcatcgccgggacaagtttcctattgctcacctgaatac
aatcccatgcacccgccagggtcagcagtattgcaaccacctccagataatatttctgtt
gctcaactttccccggagagagaaaggcgcaattcttcttaccagtggatgaacaaaacg
gtacaatcatcttccacgggcaaaacaagaacgaaggagaaatacagagtggtttacacc
gaccaccagagactggagctggagaaggagttccattttaatcgttacatcacgatcaga
agaaagtcggaacttgcggggaaccttggcctttcagaacgacaggtgaagatctggttt
caaaatcgccgagccaaggaaaggaaattaatcaaaaagaaaatgggatctgatggcagc
ggaggatcagtgcacagtgacccgggatcagtgagccctctgccggtaccaggctcactc
agtccgtcggatattcacggctctctctacccaccccccggaatgaacaccttggcatct
attaggaacatacagcaagttactgtcactcagtag
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