Oncorhynchus nerka (sockeye salmon): 115132145
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Entry
115132145 CDS
T07952
Name
(RefSeq) troponin C, skeletal muscle isoform X1
KO
K12042
troponin C, skeletal muscle
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04020
Calcium signaling pathway
one04814
Motor proteins
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115132145
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115132145
04820 Cytoskeleton in muscle cells
115132145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115132145
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
115132145
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
EF-hand_11
SPARC_Ca_bdg
SAPC2_N
TerB
Syntaxin
EF_EFCAB10_C
EMG1
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
115132145
NCBI-ProteinID:
XP_029520287
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All DBs
Position
LG7:complement(40035900..40039015)
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AA seq
160 aa
AA seq
DB search
MTDAQQEARSFLSEEMLNEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPTREELDEII
EEVDEDGSGTIDFEEFLVMMVRLLKEDQAGKSEEELAECFRVFDKNADGYIDREEFAIII
RSTGEQISEEEIDELLRDGDKNADGMLDFDEFLKMMENVQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgcacaacaggaggcccgctcattcttgagcgaggagatgcttaacgaattc
aaggctgccttcgacatgttcgacaccgacggtggcggcgatatcagtaccaaggagttg
ggtcaggtcatgaggatgttgggccagaacccgacaagagaggagttggatgaaatcatt
gaggaggtcgatgaggatggcagcggcaccatcgacttcgaggagttcttggtcatgatg
gtgaggctcttaaaggaggaccaggccggaaagtctgaggaagagttggcggaatgtttc
cgtgtgttcgacaagaatgccgacggctacatcgacagagaagagttcgccatcatcatc
cgcagcacaggcgagcaaatctcagaggaggagattgatgagctgctgagggatggagac
aagaacgctgatggcatgctggactttgatgaattcctcaagatgatggaaaatgtgcag
taa
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