Oncorhynchus nerka (sockeye salmon): 115133733
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Entry
115133733 CDS
T07952
Name
(RefSeq) immunoglobulin superfamily member 10-like
KO
K24400
matrix remodeling-associated protein 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
115133733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
LRR_8
C2-set_3
C2-set_2
Sp38
LRR_4
Ig_C17orf99
LRR_5
LRRNT
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
115133733
NCBI-ProteinID:
XP_029523082
LinkDB
All DBs
Position
LG2:8200178..8217357
Genome browser
AA seq
2643 aa
AA seq
DB search
MDAQLKMDRSAAFILILSMLMVPVTSLPCPRQCTCPQATEVHCTFRSLLGVPAGIPRQVE
RMNLGFNTINHVTQTALAGLRKLELLMMHGNDLHNIPNGAFKDLMSLQMLKMSYNKLKEI
NRHTFQGLWSLTRLHLDHNRLEFIHPDTFQGLTSLRLLQLEGNRLQQLHPSTFSTFSMLG
HFHVSTLRHLYLSENSLTSLPQKLLGGMPQLENLFLHGNPWTCDCRMKWFPDWDKNSPGV
LKCKKDRAYPGGQLCLLCYSPKNLRMKEVLSLDTLGCSSPVITSPDQPTTPEDTETELMT
LEEFKGPFGNITLGLTDEHGNKVDLECSVGEPRRELSKVSWEQVNPLQLTSNVSISVDLE
CPINRDNYERLWKLIAYYSDTPAHLQREIMLTKEPVPSYRYRQDLERDALYYTGVKANMV
AQPSWLMQSSVDLQLNRPQSTGKSVKLILSTHLTQIVEPELERRQRRTWVMIENTNTTRT
ALSVVVGSSAAVDCNVLSSGDTAVRWMLPDGTQLEAPYSNPDNRVSVSSTGRLDIKAVGH
SDSGIYYCIAQVSDDLSVLPFRLTVAESSSPPPLGGDETAPTLVEGFTGVPLTLNCVVSG
SPDPEINWILPDSNIVSHRANSSRALVYSNGTLRVPESRLTDSGYYKCVAMNQNGVYSLA
TKVTLTRQLGAEMRPLRRMRPQSASGVNTRVKAPMEDTEEASGDNEDAQEEVPSSSSSSS
SPPSRVELMNRRRGQGSNRGGGHPFRNTWRRPAAPRKPTTTGTNDEDKKNTVETRRRINV
ANKNIDPEKWADILAKIRDKNGQGNIIITPSSTHLTTKKNQESTTTASAKQTESPGNIEG
SIDDLHEEEEKELYTPTIIPHTPTLHTTYTTDSDADTGTNHARFTQPVTEPVTSVPQQPS
NTVTHTKTPGRHTVTPTHSQILGQLRVNVWTSSSYHDSLQGENQSTTPTASATDGEAITE
SDISPTSEDNQGAEDANEPSVFNSYNEGGDAELDPSLTTTAVRGYSESETESDEFDRSLT
ETRSTTAKLETRTRLKQHATSNITHLPLPAPSPTAELTSAVYMTKETPGEVATRLRTQNP
RRRNGGGGRRRRPNTGRKKPKPNNPLRSDFTTAATPKDALPTTTKATTATWTKIEAFDKA
KSMTDRFNTAVPSTGSQATSSGRVSHEENTGVSLYQDRSDPSVKPTTRKGTLSPHAKPLF
RSTTAPLASPTASLTETYKQTSQSSHHRAAPERASQTPNTPSPVPEQSDVHTTASQGTFT
SVPLPAVKPTETTQRGGSATVDLHPVPSPDKSPENRNTRPGVLPDGQPNTPDNRYTEGTT
EVKKVPVKEIDSVSPSIWHEITSAHGTTHAPGASTKEPFHEEAGHEKARVSTTEMPVTSE
SSYRGSDPSKTVTVKPGTTFDGHYNVRESTSATGKDRTPLENVAVFVAATTTKGVTSTMS
PVTSTSVRASVVFPSRVKPQIPVLNTPSTRVRTQPSSRTVEVPSNSNHIPDSHRERVLIS
QPDQRNNPILNRGDSILITRSDPDRQPPPADSHTTTKLESTDIKPDPVTGVKPTTTEPRT
PHRHRTVTNANTQMVKQTTTTTTLTPTTTMSVSQTSFVSLSKPQSPSSGGQRTETPTQTQ
GLSGGVSGGGQRPSVEDPAVRGKPRITNVDVQTVTVNAEMDAQLPCVAVGEPRPFLSWTR
VSTGATVAQNTRVQRFEVHPNGTFIIRNSQPQDRGQYLCMVQNQYGVDKMVVSLMVLAQH
PRVLQPRYRDATVYHGDGIDLECQVQGHPMPRVTWVLPDRVHLTAPPALGPANPASGPQP
GPQSGPKRVDLLGNGTLRITQASYTDRGIYKCIGSSVAGADTVSVRLHVAALAPVIQQPR
YENVSLPEGRTAYIHCTAKGAPTPIIRWTTPDGVQLLTSQFVNGRHFFVFPNGTLYIRGL
GKGDAGRYECVASNAVGASRRTSVLTVLRLPSSTEARITSSSPQRTDVVYGGLLRLDCIA
TGKPEPRIVWRTPSKKLVDSQYSFDPRIKVFTNGSLAIQAMTEKDDGDYLCVARNKMGDD
YMLLRVNVLTKPAKIEQKQLLASQKVMYGGDLKVDCVASGLPNPEIRWALPDGTMINTLK
QTDSRARGGRTRRYVVFDNGTLYANDVGMREEGDYTCYAENQIGKDEMKVHVKVVADPPI
IRDKTQSPEVVRVLYGETVSLKCSAKGEPNPVITWLSPTNRAIASSPAKYQVHNDGTLMV
QKAQHFDAGNYTCTARNSAGQDRKVTRVEVLVTPPTINGLRGMVNTIRVTAIRDQRTMLA
CEAVGTPIPQVMWVLPENIVLPAPYYGSRMTVHRNGTLDIRSPKGTDSAQLACIARNEGG
EARLMVHLEVREMVERPQLRGPKTESLSLTVGSTMTLNCSFEGGPAPPTVTWILPNGSPI
MRGAQFSKFFHRPDGSLVITNPSVSESGMYRCLVRNVAGLVERTITLAPERKPEINNRYN
SPISIMNGESLQLHCLSTGDPLRLTWTLPSGVVLGRTQRAGRYAVLANGTLAIQQASVYD
RGSYVCRAANEYGSALLSVPVIVIAYLPRITNGSPPVIYARHGVAVQLNCIATGIPRAEI
AWETPDRTRLAVSAQPRLFGNKYLHPQGSLIIQNPTQRDQGFYKCTARNVIGVDTKATYL
HVF
NT seq
7932 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcagctgaagatggaccgttccgccgcattcatattgatactgtccatgctg
atggtgccagttacaagtctcccctgcccgcgccagtgcacgtgccctcaggccacagag
gtgcactgcacgttccgttccctgctcggggtgcccgccggcatacccagacaagtggag
cgcatgaacctggggtttaacaccataaaccatgtgactcagaccgctctggctggtttg
aggaagctggagcttctgatgatgcatgggaatgatctccacaacattcccaacggggcc
tttaaggatctcatgtccttacagatgctgaagatgagctataacaaactgaaggagatc
aacagacacactttccagggtctgtggtctctgaccagactccacctggaccacaaccgt
ctggagttcattcacccagacaccttccagggcctcacctccctacgtctcctacagctg
gaggggaacagactgcagcagctccacccctctactttttccaccttttccatgttggga
cacttccacgtctccaccctccggcacctgtacctgtcggagaacagcctgacctcgctg
ccccagaagctgctgggaggaatgccccagctggagaacctcttcctgcatgggaatcct
tggacatgtgactgcaggatgaagtggttccccgactgggacaaaaactcaccaggtgtg
ctgaagtgtaaaaaggacagggcctacccaggaggtcagctctgccttctgtgttactcc
ccaaagaacttacgaatgaaagaagtcctgagcctggatacactgggctgctccagccct
gttatcacctctcctgatcaacctacgaccccagaggacacagagacagagctcatgacc
ctggaggagttcaaggggccatttggcaacattaccttaggcctgacggacgaacatggg
aacaaagtggatctggagtgcagcgtcggagagccccgcagagagttgtctaaggtcagc
tgggagcaggtcaacccactgcagctgacctctaatgtgagtatctctgtggatctggag
tgccccatcaacagggacaattatgagagactctggaagctgatcgcctactatagcgac
acgcccgctcacctgcagagagagatcatgctgactaaggagccggtgcccagctacagg
tacaggcaggacctggagagagatgcgttgtactacacaggggttaaggctaacatggta
gctcaaccatcctggctgatgcagagctctgtggacctgcagctgaacaggccccagtcc
actgggaagagcgtcaagctgatcctcagcacccacctcacacagatcgtggagcctgag
ctggagcgcagacaacgcaggacatgggtcatgatagagaacacaaacactaccaggacg
gcgctgagtgttgtagtgggcagctctgctgcagtagactgtaacgtgttgagctcagga
gacacagcggttcgctggatgctgccagacgggacccagttggaggcaccgtacagcaac
ccagacaacagggtatcagtgtcgagcaccggcaggttggatattaaagctgtaggacac
tcagactcagggatatattactgtattgcccaggtctctgacgacctcagtgtcctccct
ttccgcctgacggtcgcggagtcctccagtcctccccctcttggaggggatgagacggcg
cctaccctcgtagaggggttcaccggtgtccctctcactctgaactgtgtcgtgtctggc
tctcctgaccctgagatcaactggatccttcctgacagcaacatagtgagtcacagagcc
aactcttctagagcgctggtgtattccaacggaactctgagagtcccagagagtcgactg
acagacagtggatattataagtgtgtggccatgaaccagaatggtgtgtattccctggct
actaaggtgactctcaccagacagttaggagcagagatgcgaccactgaggagaatgagg
ccacagtccgcttcaggggtcaacaccagggtcaaagcccccatggaggacactgaggag
gcatcaggggacaatgaggacgcacaggaggaagtcccctcctcctcttcctcctcatcc
tcacccccgagccgtgtggagctaatgaatcggcggagaggtcaaggttcaaacaggggt
ggaggacatccatttagaaacacatggaggcgacctgctgcacctagaaaaccaaccacg
acagggactaatgacgaagacaagaaaaacacagtggagacgaggaggaggattaacgtg
gcaaacaaaaatatagacccggagaagtgggcggacattttggccaaaatccgtgacaag
aacggacagggtaacattatcataacacccagctcaactcacctcaccacaaagaagaat
caggagtcaacgacaacggccagtgctaagcagacagagtctccgggcaacatagagggg
tcaatagacgacctccacgaggaagaggagaaagagctatacacacccactattataccg
catacacccactctacacactacttacaccacagactccgatgcggatacaggcacaaat
catgctcgtttcacgcagccggttacagagcctgtcacatctgttccccagcagcccagt
aacactgtcacacacacaaagacgccaggcaggcacacagtcacacccacacactcccag
atcctgggtcagctgcgtgtgaacgtctggaccagttcttcataccacgattctttacaa
ggagaaaatcaaagcaccacccccaccgcttcggctacagatggtgaggcgattacagag
tctgatatctcacccacgtctgaggataatcagggggcggaagacgctaacgaacccagt
gtttttaacagctataatgaaggaggtgacgctgaacttgacccgtcactcaccaccacc
gcagttagagggtactctgaatcggagacggagagcgatgaatttgatcgctctctcacc
gagactcggagcacaactgctaagctagaaacacgtacacggctaaagcagcatgcaacg
tcgaatataacccatcttccactccccgcaccctctcccacagccgagctcacttcagct
gtgtatatgacgaaggaaactccaggggaggtggctactcgactcagaacccagaacccc
aggaggaggaatgggggagggggcaggagaagacggcccaatacgggcagaaagaagcca
aagcctaataatccgttgagaagtgattttacaaccgcagccacacctaaggacgcgctc
ccaacaactaccaaggcaaccactgccacgtggactaaaatagaagcgttcgacaaggcc
aaaagcatgacggacaggtttaataccgcagttccatcgacgggcagccaagcaacgtca
tcaggccgagtgagtcacgaagagaacacaggagtctctttataccaagacaggagtgac
ccttcagtgaagcctacaacacgaaagggcaccctttcaccacacgccaaaccactgttc
aggagcacaacagccccactggcgtctcccacagcctctttaacagaaacatataaacaa
acatcccagagcagccatcacagagcagccccagaaagagcctctcagactccgaacact
ccgagcccagtcccagagcaatcggatgtgcacacgacagccagtcaggggacatttaca
agcgtcccccttcctgcagttaaaccaaccgagacaacacaaaggggaggcagcgctact
gtagaccttcaccctgtcccaagtcctgacaagtccccggagaatcgcaacactcgaccg
ggagtgctaccagatggacagcccaacacaccagacaatcgatatacagaaggtacgact
gaggttaaaaaagtgccggtcaaagagattgacagcgtgtccccatctatctggcatgaa
ataaccagtgcacacggcacaacacacgccccgggtgcctcaacaaaagagccctttcat
gaagaggcaggacatgagaaggctcgggttagtaccactgaaatgccggtgacatctgaa
agctcttatcgcggatctgatccttctaaaacagtcactgttaagcccggaacaaccttt
gatgggcactataacgtcagagaaagcacttccgccacaggcaaagaccgaacaccattg
gaaaatgttgcggtttttgttgctgctacgacaacaaagggtgttacttcaactatgtca
cctgtcacctccacatcagtgagggcatctgtagttttcccctctagggtgaagcctcaa
atccctgtactaaacactccatccactagggtcaggacccaaccttcatccagaacagtg
gaggttccctccaactccaaccacatcccagacagtcacagagagagagtcctcatctct
caacccgaccagaggaacaacccgatcctcaacagaggagactccatcctaatcaccaga
tctgaccccgacagacaaccaccaccagccgactcccacaccacgactaaactagagtca
actgacatcaagcctgatccagtcaccggtgttaaaccaaccaccacagaacccagaaca
ccccacaggcacaggacagtcacaaacgcaaacactcagatggtcaaacagacgaccacc
acaaccactctcactcccaccaccacaatgagcgtttctcagacttcatttgtgtctttg
tcgaagcctcagagtccatctagtgggggccagaggacagagacccctacccagacacag
gggttatcaggtggggtgtctggaggtggtcagagaccctccgtagaagatcctgctgta
agagggaagccccggatcaccaacgtggatgtgcagacagtgacagtgaatgcagagatg
gatgcacagctgccctgtgtggctgtaggggagcccaggcctttcctctcctggacgaga
gtctccactggagcgacagtagcccagaacactcgggtccagaggttcgaggtccatccc
aacggcacgtttatcatccgtaacagccagccccaggaccgaggccagtacctctgtatg
gtccagaaccagtatggcgtggacaagatggtggtctccctgatggtgctggcccagcat
cccagagtgctccagccgcgctaccgcgatgctaccgtgtaccacggggacggcatcgat
ctggagtgccaggtacagggacatcccatgccccgggtcacctgggtgctgcctgacagg
gtccacctcactgcccccccagccctgggccctgccaacccagccagtggcccccagccc
ggccctcagtctggccccaagcgcgtggacctcctcggtaacggtactctccggataacc
caggccagctacacagacagagggatctataaatgtatcggcagcagcgtggcgggagcc
gacaccgtctctgtccgactccatgtggcagccttggctccagtcatccagcaacctcgc
tatgagaacgtgtccctccccgagggccgcacggcctacatccactgcaccgccaaagga
gcccctacacccatcatccgctggaccacgcccgacggagtccagctcctcacctcgcag
ttcgtcaacggccgccatttctttgtcttccccaacgggaccctgtacatccgtgggcta
ggcaaaggcgacgcggggagatatgagtgtgtggccagtaatgcggtaggagcctccagg
agaaccagcgttctgacagtactgagactcccatcctccaccgaggccaggattacctcc
tcgtctccccagaggactgacgtggtctatggggggctgctgaggctcgactgcattgcc
acaggaaaaccagagcccaggatcgtctggaggaccccctctaagaaactagtggattcc
cagtacagcttcgaccccagaataaaggtgttcaccaacggttctctggccatccaggcc
atgacagagaaagatgatggggactacctgtgtgtggcccgaaacaagatgggggacgac
tacatgcttctgagggttaacgtgctgaccaagccggccaagatcgagcagaagcagctg
ctggccagtcagaaggtgatgtatggaggagacctgaaggtggactgtgtagcgtctggc
ctcccgaaccctgagatccgctgggctctgccggacggcaccatgatcaacacactgaaa
cagacggatagtagggctagaggtgggcgcacccgcagatacgtggtgttcgacaacggg
acgttgtacgccaacgacgtggggatgagagaggaaggagactacacctgctacgctgag
aaccagatagggaaggatgagatgaaggttcacgtcaaggttgtggcggaccctccgatc
atcagagacaaaactcaaagccctgaagtcgtcagggttctttatggggagaccgtgtct
ctgaagtgcagcgccaagggagagccgaacccagtcatcacgtggctctcccccactaac
cgggccattgcctcctcccccgctaagtaccaggtccataatgatggtacattaatggtc
cagaaggcacaacactttgatgctggtaactacacctgcacagctaggaacagtgccggc
caggaccgcaaagtcaccagggtggaagtccttgtgacgccgccgaccatcaacggactg
agaggtatggtcaacactatcagagtgacggctataagggaccagcgcaccatgctggcc
tgcgaggccgtggggacacccatcccccaggtcatgtgggtgttaccggagaacatcgtt
ctcccggcaccatactacggcagcagaatgacagtgcatcgtaacggtacgttggatata
cgttcgccgaaggggaccgactcggctcagctggcctgcatcgcacgcaacgagggcggg
gaggccaggctgatggtccacctggaggttagagagatggtagagaggccgcagctcaga
gggcccaaaacagagagcctctctctaacggtaggcagtaccatgaccctgaactgctcc
tttgaaggaggcccagcacccccaacggtaacctggatcctccctaatggttccccaatc
atgaggggtgcccagttctccaagttcttccaccgacctgacggctccttggtcatcact
aacccctctgtctctgagagtggtatgtaccgctgcctggtgaggaatgtcgccgggcta
gtggaacgtactattactttagccccggagaggaaaccagagatcaataaccgctacaac
tcccccatcagtattatgaatggggagagcctccaactccactgtctctccacgggggac
cccctccggttaacgtggaccctgcccagtggagtggtcctggggcggacacagagagcc
ggtcgctacgccgtcctagccaatgggacgctcgcaatccagcaggcgtccgtctacgac
cgcggctcctacgtctgccgagcggccaacgagtacggcagcgccctgctctccgtgccc
gtcatcgtcattgcgtacctgcctcgcatcaccaatggctcgcctcccgtgatatacgct
cgccacggcgtggcggtccagctgaactgtattgccacggggatcccccgagctgagatt
gcctgggagacgccggataggacgcggctagcggtcagtgcccagccacgcctctttggc
aacaagtacctccacccacaaggttctctcatcatccagaaccccacgcagagagaccag
ggcttctacaaatgcaccgccaggaacgtgataggggtcgacactaaagccacctatcta
catgtgttctga
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integrated database retrieval system
