Oncorhynchus nerka (sockeye salmon): 115135732
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Entry
115135732 CDS
T07952
Name
(RefSeq) neuronal PAS domain-containing protein 2-like isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115135732
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115135732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
Motif
Other DBs
NCBI-GeneID:
115135732
NCBI-ProteinID:
XP_029526632
EnsemblRapid:
ENSONEG00000025060
LinkDB
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Position
LG10:40808628..40879228
Genome browser
AA seq
869 aa
AA seq
DB search
MDNLSDFGSLCPSSRREWDTSSCVDDLMDEDDKDRAKRASRNKSEKKRRDQFNVLIKELC
TMLQGQGHPRKMDKSTILQRTIDFLQKQKEITAQTESCEIRQDWKPSFLSNEEFTQLMLE
ALDGFLIALTTDGNIIYVSDSVSSLIGHLPSDMVDQNILNFLHEREHGEVYKLLSSHMLM
TDPISADILDSKTHVEFCCHLARGNSHPKEPPTYEYVKFVGDLKFHNNVPTSSCNGFDLT
LPRTLPSSLEEQVCLVATVRLVTPQFLKDLCNVEGPCDEFTSRHSLEWKFLFLDHRASPI
IGYLPFEVLGTSGYDYYHVDDLELIARCHKQLMQFGKGKSCYYRFLSKGQQWIWLQTHYY
ITYHQWNSKPEFIVCTHTVVSYAEVRAERRREFGLEETSPDMATSSPMKAQEVYLDICPN
LDPSGLDRMSGARSVSSHSSRKSSHTALSDTASANSSLRYTDACTPSRQSASIAGTEKNL
SRLAPSSAKLQQQQQKPQQQQQSMYQQQPPEPQLGVMHQLKEQLEERTRILQMDIKTQQQ
ELHDIKEKLQLANLQMLLQQPVHSDFGQVQQQQQQPQHQGPGRPAQQQQAQSGVIRQATS
HSKQPLHGAHGSSPHSLLTEHSTPSPQVQQRLIRSAGGQVQAVSLPVQTHANLTMPFYNN
PMMFSQQTTTQALQDVNQRHSDSEFSQERQLRMLLNQPVQTLVPDSRVSSQASQCNTAIQ
QTKYTLEQQMMTPSFPMQHVNCNAVLVPSPVFTSSIMIPHNSFITHQAQPTYHAQQQACQ
HSLQLQQPQQFFQMQPQGLLHSGTTQAFFHTTNVPQQGTVSYIQQQPQQQQQPQQQQQQQ
QQQQQQQRQHHHSQNQPGSLSDFRNMLTQ
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctttccgactttgggtccctatgtccgtccagcaggagggaatgggacacc
agcagctgtgtggatgatttgatggacgaagatgataaagacagggcaaaaagggcatct
cggaacaaatcagaaaagaaaagaagagaccaattcaatgtgctcatcaaggagctatgc
accatgctgcagggccaaggccatccacgcaagatggacaagtctaccatactgcagaga
actatcgacttcctgcagaaacagaaagaaatcacagcacagacagagtcatgtgagatc
cggcaggactggaagccttcgttcctcagtaatgaggagttcacccagttgatgctggag
gctttagacggtttcctcatagcactaactacagatggaaacattatatatgtgtccgac
agtgtgtcttcactcattggccatttaccgtcagatatggtggaccaaaatatcttgaac
ttcctccatgagcgtgagcatggggaggtctataagctgctatcatcccacatgctgatg
actgaccccatctctgctgacatcctggacagtaagacacacgttgagttctgctgtcat
ttagccagaggaaacagccacccaaaagaaccgcctacatatgagtatgttaaatttgtc
ggagatttgaagtttcataacaatgtgcctacatcttcttgtaacgggtttgatttgaca
ttaccaagaaccctgccgtcatcgttggaagagcaggtctgccttgttgccactgtacga
ttagtcactccgcaatttttaaaggatttgtgtaatgtggaaggtccctgtgatgaattc
acatccagacacagccttgaatggaagttcctgttcttagatcacagagcttcaccaatc
atcgggtacttgccctttgaggttcttgggacttctggttacgattactatcatgtggat
gacttggagcttatagcgcggtgtcataagcaattaatgcagtttgggaagggtaaatcc
tgctactatcggtttctaagcaagggtcagcagtggatctggctccagacacactactac
attacataccaccagtggaactccaagccagagttcatagtgtgcactcacacagtcgtc
agttatgcggaggtgcgagcggagaggaggagagagtttggcttggaggagacgtcccct
gacatggccacttcgtcacccatgaaggctcaggaggtgtacctggacatctgtcccaat
ctggacccctccggactggacaggatgagcggggcacgctcagtgtcctcccacagctcc
cggaagtcctcccacacggccctgtccgacacggcatcagccaactcatctttgcggtac
acagatgcttgcacaccatcacggcagtctgcatccatcgctgggacagagaagaatttg
tccagactcgcacccagtagtgcaaagttgcagcaacaacaacagaagccacagcagcag
caacagtccatgtaccagcagcagcctcctgagcctcagctaggtgtcatgcaccagctc
aaggagcagctggaggagaggacacgcatcctgcagatggacatcaagactcagcaacag
gagctgcatgacatcaaggagaaactgcagctggctaacctccagatgttgttacagcag
ccggtccacagtgactttggccaggtccaacagcagcagcaacagcctcagcatcagggt
ccagggaggccagcccagcagcagcaggcccagtctggggtgatcaggcaggctacgagc
cactccaaacagcctcttcatggagcccacggctcgtcccctcactctctcctcacagag
cacagcacaccctcccctcaggtgcagcagaggttgataaggagtgcaggcgggcaggtg
caggcagtcagtctcccggtgcagacccatgccaacttgaccatgcccttctacaacaac
cccatgatgttctctcagcagacaaccacacaggcactgcaggatgtcaaccaaagacac
tcagactctgagtttagccaagagagacagctacgcatgctgctcaaccagccagtgcag
acactcgtacctgatagccgtgttagctcccaggcttcccagtgcaacacagccatccag
caaaccaaatacaccctggagcagcagatgatgaccccgtcgtttcccatgcagcatgtg
aactgcaacgctgtcctggtcccctctcccgtcttcacgtcctctatcatgatccctcac
aacagctttatcacgcaccaggcccagcccacctaccatgctcagcagcaggcctgccag
cactctctgcagctgcagcagccccagcagttctttcagatgcagccccaaggactctta
cacagtggaaccactcaggcttttttccacactactaatgtcccacagcaaggtactgtc
agttatattcaacaacaaccgcagcaacaacaacaaccgcaacaacagcagcaacaacag
cagcaacaacagcagcaacagcggcaacaccaccattcccaaaaccagcctggcagcctt
tcagacttccgaaatatgctcactcagtag
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