Oncorhynchus nerka (sockeye salmon): 115138935
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Entry
115138935 CDS
T07952
Symbol
colec11
Name
(RefSeq) collectin-11 isoform X1
KO
K10066
collectin sub-family member 11
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115138935 (colec11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115138935 (colec11)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
one04091
]
115138935 (colec11)
Membrane trafficking [BR:
one04131
]
Endocytosis
Phagocytosis
Opsonins
115138935 (colec11)
Lectins [BR:
one04091
]
C-Type lectins
Collectins
115138935 (colec11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
115138935
NCBI-ProteinID:
XP_029531977
LinkDB
All DBs
Position
LG12:28044489..28049836
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AA seq
242 aa
AA seq
DB search
MKLSLHLTGEEGEKGVKGAPGRPGRMGPPGEIGHLGVKGQKGIMGHYGKIGPSGVKGAKG
DMGDAGSRGPNGDPGVPCECTPLRKIIGEMDILVTQLSNELKFIKNALPSPAAVAGIKET
DSKVYLLVKEEKHYTDAEVYCQGRGGHLAMPKDEGANAAIAGYITEAGLSRVYIGINDID
REGHFTYVDNSPMSTFSKWREGEPNNAYDDEDCAEMVAVGDWTDVACHSTMYFVCEFDKD
SG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttctctccatttgacaggagaggaaggagaaaagggagtgaaaggagcacct
gggagaccaggaagaatgggtccaccaggggagataggacatctgggagttaaagggcag
aagggaataatgggacattatgggaagattggccccagtggagtcaaaggtgcaaaggga
gatatgggtgatgctggatcaaggggcccgaatggtgatccaggtgttccatgtgaatgc
acacccctgaggaaaattattggtgagatggacatcctagtgacacagttatccaatgag
ctgaagttcataaaaaatgcactgccctcccctgcagctgttgccggcatcaaagagacc
gacagcaaggtctatctgctggtcaaggaggagaaacactacaccgatgcagaggtctat
tgtcaggggaggggtggacacctggccatgcccaaggacgagggggccaatgcggccatc
gctgggtacatcacagaggcgggcctgagccgggtgtacattggtatcaacgacatagac
cgcgagggccatttcacctacgtggataactccccaatgagcaccttcagcaagtggagg
gaaggggaacccaacaatgcctacgatgacgaggactgtgctgaaatggtggcggtgggg
gactggaccgatgtggcctgccactccaccatgtactttgtctgtgagtttgacaaggac
agtggctga
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integrated database retrieval system
