Oncorhynchus nerka (sockeye salmon): 115139169
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Entry
115139169 CDS
T07952
Name
(RefSeq) photoreceptor cilium actin regulator-like
KO
K24165
photoreceptor cilium actin regulator
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115139169
04812 Cytoskeleton proteins [BR:
one04812
]
115139169
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115139169
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115139169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
Motif
Other DBs
NCBI-GeneID:
115139169
NCBI-ProteinID:
XP_029532162
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Position
LG13:2268455..2274116
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AA seq
880 aa
AA seq
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MGCSPSKGHLFPGIPDGVHKALLPVPPEVGNIKPVEGENQDIDNTDIDEEVEELPLSAEE
DNPMAALGKVADMAPNTAVVSNLGAVSQIEVKMTSQVRDTQSEELLEKQAKKVKKRKKNK
GVKQGCRKEKEINTSIIQGKVDLPMLMVRAHQAAYEYLNPNISKCETLLGLLDQAAQTQL
SLQPMMTAIVMRFEEVNQALEEMAEEGELMLKEHGNHMAWPSEIKDPAPTPSKPIADPSE
TPPDLLQLLLQHSTEKMKLVGSSIQGLGDTTLEEAADFFASLSRLLGERLQAKRAVEERL
TQVLARVEAAAKCNLDDLSLHSEDSGIGGENESLVGSERHRRQWGSSGSGGSARPTPPSH
SPDQVCLNEGEEGEENEEEDDDDEDEEEERSGRVRSNSSPPDPIQNTKHSKGQPPKRPQT
AAPLGRPVRPPRSLSIESLHVQELQQKELDRRTGNNSLRRYSSGGQRVARYGLKGSTKAN
QAPNSLPAIAPQPPGRNSVKRLINTFSGGVDGRPGQSLPSAHLRGSRSSGTPLLPDIVSG
NNNKNIWAAEGGEGLDDDNLPPPPPEVLMDNSYESNEENPDDEEGEEEDTDSRGHPVPRQ
RSTASQRLRASLQNMTVLPNRGSVGPIRQDPETRGGQQPASEGDQESEQAASLYHKARKI
IHLRNAVESTANRSDQGVRGPLRAGVSLRQGSSNPYEGEYYPTSMPPTVPPVSRVRLPPS
CPSTHHRLPSPPAFAQPNPPSRPSSPRVLRWSREDSGEDMSPSVSFNDARSVFCQNSQSN
SQSWTPHYSSTLPRPYGEPSRGRLSTRGSQTVSRRSQSDQRPSLTTQQQDLSNPGTPRGR
TRGSDPNMSKSSERMVNGLVMEGDNQSDPSAVDTDLDPEQ
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggttgttccccatccaaaggtcatctcttcccagggatcccagatggggtacacaag
gctctgctgccagtaccaccagaggtgggtaacatcaagcctgttgagggagaaaaccaa
gatattgacaatacggatattgacgaagaagtggaggaactcccactatcagctgaagag
gataatcctatggccgccctgggaaaagtggcggacatggcccccaacacagccgttgtg
tcaaacctaggggccgtctctcaaatagaggtcaaaatgacatcacaggtgagagacaca
cagagtgaggagttactggaaaagcaggcaaaaaaggtcaagaagcgaaagaagaataag
ggcgtgaaacaaggctgccgaaaagaaaaggagataaacacctcaatcatccaggggaag
gtggaccttcccatgctcatggtgagagctcaccaggccgcttacgaatacctgaacccc
aacatttccaagtgtgagaccctgctggggctgctggaccaggccgcccagacccagctc
tccctgcagcccatgatgacagccattgtgatgcgtttcgaggaggtcaaccaggccctg
gaggagatggctgaggaaggggagctgatgctgaaggagcatggcaaccacatggcctgg
ccctccgagataaaggacccagctcccactccctccaagcccattgctgacccatcagaa
acccccccagacctgctgcagctgctgctccagcattctactgaaaagatgaagctggtg
gggagctcgatccaaggcctgggagacaccactctggaagaggcggcagacttctttgcc
tcgctatctagactactgggagagaggctgcaggccaagcgggcagtagaggagcgtctg
acccaggtgctggcacgcgtggaggcagctgccaagtgcaacctcgatgacttgtccctg
cacagcgaggacagtggaatcgggggagagaacgagtcactggtgggatcagagcgccac
cgtcgtcaatgggggagttctgggtccggtggcagtgcacgccccacacccccaagccat
tcacctgaccaggtatgccttaacgaaggtgaggagggggaagaaaacgaggaagaggat
gatgatgatgaggatgaagaggaagagaggtcagggagggtgcggtccaactcatccccg
ccagaccccatacagaacaccaagcacagcaaagggcagccacccaaacgaccccaaaca
gctgcccccttgggcaggccggtgagaccaccacggtcactgtccatagaatctctacat
gttcaggagctgcaacagaaagaactggaccgacggacgggaaacaactctctgagaaga
tactcttcaggggggcagagggttgctagatatggcctcaaagggtccacaaaggcaaac
caagcaccaaattcactaccagcgatagcaccacaacctcctggccgcaactccgtcaaa
agactcataaacacattcagtggtggggtggacggcagaccaggccaaagtctccctagt
gcacaccttagggggtctaggagcagtggaactcccctcttacccgacattgtcagtggt
aacaacaataagaacatctgggcagcagaaggtggggagggcctggatgatgacaacttg
cccccgcctccccctgaggtcctgatggacaattcctatgagagcaatgaggaaaacccg
gatgatgaggaaggggaagaggaggacaccgacagtaggggccaccctgtgccacgccaa
aggagcaccgcctctcagcgcctgagggcctcattgcagaacatgacggtgctgcccaac
cgtggaagtgttggaccaatcagacaggatcctgagacgaggggtggacagcagccagca
tctgaaggcgaccaagagagtgagcaggccgcctctctctaccataaggcccgcaagatc
atccacctgcgcaacgcagttgaatccactgcaaacagatctgaccagggggttcgagga
ccccttagagctggggtgagtctcaggcaaggaagcagcaacccctatgagggggagtat
taccccaccagcatgccaccgaccgtcccaccagtctccagagttcgcctaccaccctct
tgtccctctacacaccacagactaccaagcccccctgctttcgcacagcctaatccaccc
tcacgtccatcctctccccgggtcttgagatggagcagggaggacagtggtgaagacatg
tcaccctcagtgtccttcaacgatgcccgatctgtgttctgtcaaaatagccaatccaac
tcccagagctggaccccccactatagctctacgctccccaggccctatggtgagccctcc
cggggaaggctgtccacacgcgggtcccagactgtcagtcggcgcagccagtctgaccag
agacccagcctgacaacacaacaacaggatttgtccaacccaggcacaccacggggccgg
acacgaggaagtgatccaaatatgtccaaaagcagtgagaggatggtcaatggtcttgtg
atggaaggcgacaaccaatcagatccaagtgctgttgatactgatttggatcctgagcag
tag
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