Oncorhynchus nerka (sockeye salmon): 115141053
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Entry
115141053 CDS
T07952
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04145
Phagosome
one04210
Apoptosis
one04517
IgSF CAM signaling
one04530
Tight junction
one04540
Gap junction
one04814
Motor proteins
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115141053
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115141053
09143 Cell growth and death
04210 Apoptosis
115141053
09144 Cellular community - eukaryotes
04530 Tight junction
115141053
04540 Gap junction
115141053
09142 Cell motility
04814 Motor proteins
115141053
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115141053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115141053
03036 Chromosome and associated proteins [BR:
one03036
]
115141053
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115141053
04147 Exosome [BR:
one04147
]
115141053
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115141053
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
115141053
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
115141053
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115141053
Exosomal proteins of other body fluids (saliva and urine)
115141053
Exosomal proteins of colorectal cancer cells
115141053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
115141053
NCBI-ProteinID:
XP_029535506
LinkDB
All DBs
Position
LG2:45509394..45513164
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYSLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDFVLD
RTRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatccacgtgggtcaggctggcgtccagattggcaatgcctgc
tgggagctctacagtctggagcacgggatccagccggacggtcaaatgcccagtgacaag
accattggaggaggagacgactccttcaacaccttcttcagtgagactggagctggaaag
cacgtccccagggctgtgtttgtagatctggagcccactgtcatcgatgaggtgcgcaca
ggaacataccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtgggcattacaccatcggcaaagagattattgactttgttctggac
aggacccgcaaactggctgaccagtgcactggcctccagggattcctggtcttccacagc
ttcggaggtggcaccggttctggtttcacctccctgttgatggagcgcttgtctgttgac
tatggcaagaagtccaaacttgagttctccatctacccagctccccaggtgtccacagcc
gttgttgagccctacaacgccatcctgaccacccacaccaccctggagcactctgattgt
gctttcatggtagacaatgaggccatctatgacatctgccgcaggaaccttgatatcgag
cgtccttcctacactaatcttaacaggttgatcagtcagattgtgtcctccatcactgca
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttcccgctggccacctatgccccagtgatctcggcagagaag
gcttaccatgagcagctctcagtgtctgagatcacaaatgcttgctttgagccagcaaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggcgacgttgtgcccaaagatgtcaatgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaattaccagccacca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggcagaggcctgggcccgtcttgaccacaagtttgacctgatgtacgcc
aagcgtgcttttgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaggacatggctgccctggagaaagattatgaagaggtgggtgtcgattccatt
gagggagaggaggagggagaggagtattaa
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