KEGG   Oncorhynchus nerka (sockeye salmon): 115141053
Entry
115141053         CDS       T07952                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04145  Phagosome
one04210  Apoptosis
one04517  IgSF CAM signaling
one04530  Tight junction
one04540  Gap junction
one04814  Motor proteins
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    115141053
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115141053
  09143 Cell growth and death
   04210 Apoptosis
    115141053
  09144 Cellular community - eukaryotes
   04530 Tight junction
    115141053
   04540 Gap junction
    115141053
  09142 Cell motility
   04814 Motor proteins
    115141053
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115141053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115141053
   03036 Chromosome and associated proteins [BR:one03036]
    115141053
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:one04812]
    115141053
   04147 Exosome [BR:one04147]
    115141053
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115141053
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     115141053
Cytoskeleton proteins [BR:one04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    115141053
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115141053
  Exosomal proteins of other body fluids (saliva and urine)
   115141053
  Exosomal proteins of colorectal cancer cells
   115141053
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 115141053
NCBI-ProteinID: XP_029535506
LinkDB
Position
LG2:45509394..45513164
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYSLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDFVLD
RTRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEEEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctccatccacgtgggtcaggctggcgtccagattggcaatgcctgc
tgggagctctacagtctggagcacgggatccagccggacggtcaaatgcccagtgacaag
accattggaggaggagacgactccttcaacaccttcttcagtgagactggagctggaaag
cacgtccccagggctgtgtttgtagatctggagcccactgtcatcgatgaggtgcgcaca
ggaacataccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagcc
aacaactacgcccgtgggcattacaccatcggcaaagagattattgactttgttctggac
aggacccgcaaactggctgaccagtgcactggcctccagggattcctggtcttccacagc
ttcggaggtggcaccggttctggtttcacctccctgttgatggagcgcttgtctgttgac
tatggcaagaagtccaaacttgagttctccatctacccagctccccaggtgtccacagcc
gttgttgagccctacaacgccatcctgaccacccacaccaccctggagcactctgattgt
gctttcatggtagacaatgaggccatctatgacatctgccgcaggaaccttgatatcgag
cgtccttcctacactaatcttaacaggttgatcagtcagattgtgtcctccatcactgca
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctatccccgtatccacttcccgctggccacctatgccccagtgatctcggcagagaag
gcttaccatgagcagctctcagtgtctgagatcacaaatgcttgctttgagccagcaaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggcgacgttgtgcccaaagatgtcaatgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaattaccagccacca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggcagaggcctgggcccgtcttgaccacaagtttgacctgatgtacgcc
aagcgtgcttttgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaggacatggctgccctggagaaagattatgaagaggtgggtgtcgattccatt
gagggagaggaggagggagaggagtattaa

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