Oncorhynchus nerka (sockeye salmon): 115141858
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Entry
115141858 CDS
T07952
Name
(RefSeq) endothelial cell-selective adhesion molecule-like isoform X1
KO
K06787
endothelial cell adhesion molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115141858
04517 IgSF CAM signaling
115141858
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115141858
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
CTX family
115141858
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GFIT
Motif
Pfam:
V-set
Ig_3
I-set
ig
Ig_2
Ig_CD22
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
115141858
NCBI-ProteinID:
XP_029537007
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Position
LG14:complement(41876236..41953959)
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AA seq
582 aa
AA seq
DB search
MAMSGRVRALLLLLWIFQGDSQRVEMPRREMEVVKGQMVVLQAWYSPTSDIGRNSVIWNF
MANDSKQVISYSNGEPGIGSPEFRKRVGFSLSMPSANLSIYINNTQESDSGRYLCNVIIP
GAAGLSGEMRLNVKVPPSPPVCLMTGSSVLNGNVTLSCKSSSGKPIPQYKWTKNAPMSEV
FFSPMQKWRACPSTLLVLGFMDERQGTLRLSNLTKSMSGKYVCRASNTAGSDTCSINLEV
FTSSNAGAIVAATLGSIVALVAIILFLIFILRRRDHEEEELANDIKEDAQAPKRVSWAKS
GTGSDLLSKNGTLSSIATTPHLRDPQQPNNFRYPYPTAPASDTGSVFNAYRLRPGEPNTL
QGLPGYISGTPPPRHTRPPCVANKIDATSPHRHSRPPSSNHISGTLPPGHTRPLSTSIIV
DTPPHGFSQPPSPNHVGVTSPHGHSRPPSSNNIGTPSPHGNSQPPSSNNIGAPSPHGHSR
PPSSNHIGGSTPHRHSRPPSSNHSRPPSISSIPHYGHSRSSSSNGAPPHSPPGHMVTDPD
KTEGAQPQVPHPLTSPISSTTLARIGAVPVMVPAQSQAGSLV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtctgggagagtccgagcgctcctgttattgttatggatttttcaaggtgac
tcccagcgggtggagatgcccaggagagagatggaggtggtgaagggtcagatggtggtc
ctgcaggcctggtacagccccacatctgatatcggcaggaacagtgtcatctggaacttc
atggccaacgactccaagcaggtcatctcctacagtaacggtgagccaggaataggtagt
cctgagttcaggaagcgtgttgggttcagcctgtccatgccctcggccaatctctccatc
tacatcaacaacacccaggagtcagactcaggacgatacctctgcaatgtcatcatccct
ggagccgccggactctctggagaaatgcgccttaatgtcaaagtccctccctcgcctcca
gtgtgcttgatgactgggtcatctgtgctgaacggcaacgtgacactgagctgtaagtcc
agctcgggcaaacccatccctcagtacaagtggaccaagaatgcccccatgtcagaggtc
ttcttttcccccatgcagaaatggagagcctgcccctcgaccttgcttgttctagggttc
atggatgagaggcaaggcaccctcaggctgagtaacctcactaagagcatgtcagggaaa
tatgtgtgccgagctagcaacactgccggctctgacacttgctctatcaacctggaggtc
ttcacctcctctaatgctggagcgattgttgctgctactctggggtccatcgtggcacta
gtagccatcatactcttcctcatcttcatactgaggaggagagaccatgaagaggaggag
ctagctaatgatatcaaggaggatgcccaggcacccaagcgtgtttcctgggcaaagagc
ggcacaggctcagacctcctctccaaaaatggcacgctgtcctccatagccacgaccccg
catctacgagacccccagcagcccaacaacttccgctacccttaccccactgctccggcc
tctgacacaggctctgtgttcaatgcctaccgccttcggcctggagaacccaacaccttg
cagggcctcccagggtacatcagtggcacacctccacccaggcacaccagacccccctgt
gttgcaaacaaaattgatgccacctctccacacaggcacagtcgaccccccagttctaac
cacatcagtgggactctaccccctggccacacccggcccctcagcactagtatcattgtt
gacacccctccccatgggttcagtcaaccccccagtcctaaccatgttggtgtcacctct
ccacatgggcacagcagaccccctagctctaacaacattggtaccccctccccacatggg
aacagtcaacccccaagttctaacaatatcggtgccccctctccacatgggcacagcaga
ccaccaagctcgaaccacattggcggtagcactccacacaggcacagtcgacctcccagt
tccaaccacagccgacctcccagcatcagtagcattcctcactatggacacagcagatcc
tccagttctaacggtgccccacctcattccccacctggccacatggtcacagaccccgac
aagactgagggggcccagccccaggtgccacaccctctcacctcgccaatcagctccacc
accctggcccgtataggtgctgtgcccgtcatggtgcccgctcagagccaggctggatca
ctggtatag
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