Oncorhynchus nerka (sockeye salmon): 115142450
Help
Entry
115142450 CDS
T07952
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115142450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115142450
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Others
GGA
115142450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
GGA_N-GAT
Alpha_adaptinC2
Cmr7b-like
Motif
Other DBs
NCBI-GeneID:
115142450
NCBI-ProteinID:
XP_029537785
LinkDB
All DBs
Position
LG15:4605677..4617341
Genome browser
AA seq
759 aa
AA seq
DB search
MADAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW
EAIQALMVLEACMKNCGKRFHNEVGKFRFLNELIKVVSPKYLGDRVSEVVKKRVVDMLFS
WTLSLPNEAKISDAYQMLKKQGIVTVDPELPLDKTLMPSPFSRPKNPVFENEEKSKRLAE
LLKSKKPEDLQEANRLIKNMVKEDEVRLQRASKRSSTLEEVNNSVKLLNEMLSHFSRDQS
TDGDKELIKELYGDCDKLRGTVFKLATETEDNDSSLGDILQASDDLSRVINSYKRIVEGQ
TVNGEMEPLGLSTTTQCTKDSNQSEILVDLAGLDLQSPSPPEHPPLAQHADFIPADLLYG
SAPLQDLQACPAMEDPSPRKPSAALSLLDKELLSLGLNDPVPAKDDLNNLWRTFLQAPNP
VLDLFGSALPATVFSAASTDQLGASTTEPVSKTAAPQSSVAASFPYPSAAAQAVSASFPY
PSAAAQAVSASLNHSLQDLAMLDLGSPKSMPGVINSGDLFGMGEAMGATASPRIGIPASR
SSPLPLGILPAAAAAAPTLSPKTQADDSPLLRSLSPILILPLGQASPAKFPEISLSNVHV
PLEAIKPSKLCPVTAYDKDGVRVLLHFATDCPPGRPDVLVMVVSMLNTAPLPVRNIVLQA
AVPKSMKVRLQPPSGTDLAPFNPIFPPTAITQVMLLANPLMVQDPLFHPLLLGIYDSLHL
HLHLSHLADALIQSDLQIGAFTLRHPVEQPLYNSASKSF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcggaaggggagtcgctggagtcgtggctcaacaaagccaccaacccatcc
aacaggcaggaagactgggagtacattataggattctgtgaccaaatcaataaggaattg
gaaggcccacagattgctgtgagattgttagcccataaaatccagtccccacaagaatgg
gaggcgatacaggctttgatggttttagaggcttgcatgaagaactgcgggaaaaggttc
cacaatgaagttgggaaatttaggtttctaaatgaactcatcaaagtggtgtcacctaaa
tatctaggtgacagagtgtcggaggtggtgaagaagagagtggtagatatgcttttcagc
tggacactctctttacccaatgaggccaagatcagtgatgcttatcaaatgctgaagaaa
caaggtattgtcacagttgaccctgagcttcctctggataagacactgatgccgtcgccc
ttctcccggcccaagaaccctgtgtttgagaacgaggagaagagcaagcgactggccgag
cttctgaagagcaaaaagcctgaggatctacaggaagccaaccgcctcatcaaaaacatg
gtcaaagaggatgaggtgaggctgcagagagcgtcgaagcgcagcagcaccctggaggag
gtcaacaacagtgttaaactgctcaacgagatgctcagccacttcagcagggaccaatca
acggacggagacaaggagcttatcaaagagctttacggtgactgtgacaagttgaggggg
actgtgttcaagctggccacagagacagaggacaatgacagcagcttaggtgacatattg
caggccagtgatgacctgtcccgcgtcatcaactcctataagaggattgtggagggacag
actgtcaatggagagatggagccacttggactgtcaactactacacaatgtaccaaagac
agcaaccagtctgagatcctggtagacctggctggtctggacctccagagcccctcccca
ccagagcatcctcctctagcccagcacgcagacttcatcccagccgacctgctgtacggg
tctgcccccctccaggatcttcaggcctgccctgccatggaggaccccagtcccagaaaa
ccctctgctgcactgtctttactggacaaggagctcctctctctaggacttaatgaccca
gttcctgcaaaagatgacttgaataatctgtggaggacatttttgcaggctcccaaccca
gttttggacctgtttggcagtgccctcccagctactgtattctctgcagcttctacggac
cagttaggagcttctacaacagagcctgtttctaagacagccgccccacaatcctcagtg
gcggcctccttcccctaccccagtgccgctgcccaggcagtctccgcctccttcccctac
cccagtgctgctgcccaggcagtctccgcctccctgaaccacagtctgcaggacctggcc
atgttggatttgggtagccccaagagcatgcctggtgtgatcaacagtggcgacctgttt
gggatgggtgaggctatgggtgccactgcctccccgagaattgggatccccgcctccaga
tccagccctctccctctgggtatcctaccggctgctgctgctgcagcccctaccttgtcc
cctaagacccaagctgatgacagcccccttctccgctccctgtcccccatcttgattctc
ccgctggggcaggccagcccagccaagttccctgagatctccctaagtaacgtccacgtc
cccctagaagccatcaagccaagcaagctgtgtcctgtgacggcctatgataaagacggg
gtccgcgttctcctgcactttgccaccgactgtccgccgggccggccggacgtgctggtg
atggtggtgtccatgttgaacacggcacctcttcccgtcaggaacatagtcctacaggct
gctgtacccaagtcgatgaaggtgagactacaaccgccctcgggaactgacctggcgcct
tttaaccccatcttcccccccaccgccatcactcaagtcatgctgctggccaacccacta
atggttcaggatccattattccatcctttgttacttggtatttatgattccttacattta
catttacatttaagtcatttagcagacgctcttatccagagcgacttacaaattggtgcg
ttcaccttaagacatccagtggaacagccactttacaatagtgcatctaaatctttttaa
DBGET
integrated database retrieval system
