Oncorhynchus nerka (sockeye salmon): 115144350
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Entry
115144350 CDS
T07952
Symbol
abcg5
Name
(RefSeq) ATP-binding cassette sub-family G member 5
KO
K05683
ATP-binding cassette, subfamily G (WHITE), member 5 (sterolin 1)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115144350 (abcg5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115144350 (abcg5)
Transporters [BR:
one02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG5, 8 subgroups
115144350 (abcg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane
ABC2_membrane_7
AAA_21
SMC_N
AAA_29
AAA_23
AAA_16
NB-ARC
MobB
RsgA_GTPase
ATP-synt_ab
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
115144350
NCBI-ProteinID:
XP_029541168
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All DBs
Position
LG16:complement(24821428..24834339)
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AA seq
700 aa
AA seq
DB search
MVPAPLSQRNAEWPQTDDYRKKTHIETTYICGLDEQSCETMMNGSYSMEVTPEGTESRSK
ESFKFVSEKSVVKRSGPGPSDQPQPSCCLSVSHVSYSVSERVGHWWDLATFKKKWTRQIL
NGVSFHVNSGQIMGILGNSGSGKTTLLDAISGRIGNSGILLGDVSVNGRKLKREQYQDCF
SYVLQSDNLLSYLTVEETLTYTAQLALRRDSADVIHKKVLAVMAELSLGQVAHSVIGGRI
FPGISGGERRRVSIAMQLLQDPKVILLDEPTTGLDSMTANQIVVLLAELARRDRIVIVTI
HQPRSELFRVFSRIAIMSKGELVFCGQPGEMVDFFSACGYNCPEYCNPFDIYVDLTSVDT
RCSEREATTYSRMHKITSAYQDSEINQSMLRQIEQSCQRTDKPSIPFKSKESPSGLAKLA
VLLRRTVRNLSRDRMGVLMRLSQNLIYGLFVAFFVMRLDDDITKGAVQDRIGIIYQAMGA
SPYTGMLNAVALFPALRAMADQESKDGLYQKWQMFLAYIFHILPFSIISVFIFSSFLYWT
VGMNPEMWRFLCFSAVILVPHLVGELLTLVLMGVVQDPNMVNTGVALLNVAGIMVGSGFL
RSYQQMPVVFQWLSYLTFQKYGCELLIVTEFHGLNFTCNTGSIPLPGACLMTDGDDIIDQ
GYPGALDRYTLDFLLLYSFLPALVLLGVISYKIRDCLVQH
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggtgccggcgccactgtcacaacgtaatgctgaatggccacaaacagatgactacaga
aagaagacgcacatagagacaacatatatttgtggcttggatgagcagagctgtgaaacc
atgatgaatgggtcctactctatggaagtaacaccagaggggacagagagcaggtctaag
gaatcttttaagtttgtgtcggagaagagcgtggtgaagaggtctggaccaggaccctct
gaccaaccgcaaccctcctgctgcctgagcgttagccacgtctcctacagcgtcagtgag
cgcgtggggcattggtgggacctcgccaccttcaaaaagaaatggaccagacagattctc
aatggcgtctccttccatgtgaacagtgggcagatcatgggaatactggggaactcaggc
tcagggaagaccactctcctggatgctatctctgggaggattgggaactcagggattctt
ctgggagatgtgtctgtcaacgggaggaagctgaaaagagagcagtaccaggattgtttc
tcctatgtgctacagagtgacaacctgctgagttacctgacagtggaggagactctgaca
tacacagcccagttggccctgagacgagactcagcagacgtcatccacaagaaggtgttg
gcggtgatggcggagctgagtctaggtcaagtggcccacagtgtgatcggaggacgcatc
ttcccagggatctctgggggagagaggaggagagtgtccattgccatgcagttgcttcag
gaccctaaggtcatccttctggacgagccaaccacgggccttgacagcatgacggccaat
cagattgttgttttactggctgagctggccagaagggaccgcattgtcatagtgaccatc
caccagccacgctctgaactcttcagggtcttcagtagaatagccataatgagtaaaggc
gagctggtgttctgtggccagcctggagagatggtggactttttcagcgcatgtggctac
aactgtccagaatactgcaacccctttgatatctatgtggatctgacgtcagtggacaca
cgctgcagtgagagagaggccaccacctacagccgcatgcacaagatcacctcggcctat
caggactcagagatcaatcagagcatgctgagacagattgagcagagttgccagcgaaca
gacaaacccagcatccccttcaagagcaaagagtcacccagcggcctggccaagctggct
gtgcttctcaggaggactgtgaggaacctgtctcgagacaggatgggtgtcctgatgcgt
ctgtcacagaacctcatctatggcctgtttgtggccttctttgtcatgaggctggatgat
gacatcaccaagggagcggtacaggaccggattggcatcatctaccaagcaatgggggcg
tcgccttacactggcatgctgaacgctgtagctctgtttcctgctctgagggccatggct
gaccaggagagtaaggatggcctgtaccaaaagtggcagatgttcttggcctacatcttc
cacatcctccccttcagcatcatcagcgtgttcatcttttcctccttcctgtactggacg
gtggggatgaacccagaaatgtggaggttcctgtgtttctcggcggtgatcctggtgccc
catctggtgggtgagctgctgaccctggtgctgatgggagtggtgcaggaccccaacatg
gtcaacacaggagtggcgctgctcaacgtagctggaatcatggtgggctccggattcctc
aggagttaccagcagatgcctgtggtgttccagtggctcagctacctaacctttcagaag
tacggatgtgagctgctcatcgtcacagagttccatggcctcaacttcacatgcaataca
ggcagtatacctttgccaggtgcctgtctgatgacagatggagatgacatcatagaccag
ggttacccaggagccctggaccgctacactctggacttcctcctgctctactccttcctg
cctgccctggtgctgctgggagtgatcagctacaagatcagagactgcctcgtccaacac
tga
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