Oreochromis niloticus (Nile tilapia): 100696577
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Entry
100696577 CDS
T06104
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03440
Homologous recombination
onl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100696577 (top3b)
03460 Fanconi anemia pathway
100696577 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
onl03032
]
100696577 (top3b)
03400 DNA repair and recombination proteins [BR:
onl03400
]
100696577 (top3b)
Enzymes [BR:
onl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100696577 (top3b)
DNA replication proteins [BR:
onl03032
]
Eukaryotic type
DNA Topoisomerases
100696577 (top3b)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100696577 (top3b)
FA (Fanconi anemia) pathway
100696577 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
100696577
NCBI-ProteinID:
XP_003459054
Ensembl:
ENSONIG00000010464
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Position
LG12:3677404..3699826
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AA seq
856 aa
AA seq
DB search
MRSVLMVAEKPSLAQAIAKILSKGNCTSRKGLNGACSVHEYTGIFQGQTVHFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEARGSDCVVLWLDCDK
EGENICFEVLDAIQPVMNKGSARSVYRAKFSSITDTDIWNAMNRLGEPNRNEALSVDARQ
ELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWV
IQTKVFKGKESPLTLDWNRVRVFDREVGQMFVNLAKTSREAQVELVSKKEKTKQRPQALN
TVEMLRVASSALGMGPQHTMQIAERLYTQGYISYPRTETTHYPVNFDLKGTLKQQTNNPF
WAEEVKVLLSTGINQPRKGTDAGDHPPITPMCAATEAELGSDSWRLYEYITRHFIATVSQ
DCKYLQTTIEFSIGTEAFSCSGRTLISPGYTTVMPWQGIPLEESIPVCEHGDTFSVDEIK
LIEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRKLKPTNLGI
VLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKANYQQVLQHALDIFKRKFHYFVDSITN
MDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKLYK
ELRCPLDDFELVLWTSGARGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNSLG
IGQCVECDSGVLVLDPTSGPKWRMACNKCNVVVHFFEHAHKVQVAQESCDVCDASLVAVD
FNKTRTPLPASETQHTGCVFCDPVFQDLVELKHATIRHSMHRGGGGRRGGRGRGRGRRGN
AKKPKDKMAALAAYFV
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtgtgctgatggtagcggagaagccgtccttggctcaggccattgccaaaatc
ctttctaaaggaaactgtacaagccgcaaggggctcaatggggcatgctcagtgcatgaa
tacaccggcattttccagggccaaactgtacactttaagatgacttctgtttgtgggcat
gtgatgagtctcgattttattgggaaatataacaactgggacaaagtagaccctgcagaa
ctctttagtaaagctcctactgaaaagaaggaggccaaccctaaactcaacatggtcaag
tttcttcaggttgaagccagaggcagtgactgtgtggttttgtggttggactgtgacaaa
gaaggagagaacatatgtttcgaggtgctggatgccattcagccagtgatgaataaggga
agtgccaggagtgtttaccgtgccaaattcagctccattaccgacactgacatctggaat
gctatgaaccgcctgggagagcccaaccgcaatgaagctctgtcagtagatgcacggcaa
gagctggatctgcgtattggatgtgccttcacccggttccaaacaaagtattttcaaggg
aaatatggcaatctagactcctccttaatctcctttggtccgtgccagaccccaaccctt
ggcttctgtgtggaacgccatgacaagatccagtcctttaaaccagagacttactgggtc
atccagacaaaggtttttaaaggaaaggagagtccactgacactggactggaacagggtt
agggtctttgacagagaggtgggtcagatgtttgtcaacctggccaagacatccagggag
gcgcaggtggagttggtgagtaagaaggagaagaccaagcagaggcctcaagccttaaac
acagtggagatgttgagagtggctagttctgccttaggcatgggtccccagcatactatg
cagattgctgagcgcctatatacacagggctacatcagctacccacgtaccgagacgacc
cactacccagtgaacttcgacctgaagggaacactgaaacagcagaccaacaaccccttc
tgggcagaagaggtaaaagttctactttcaactggaataaaccaacccaggaagggcact
gatgctggagatcatccacctattactcccatgtgtgctgccacggaagcagaactagga
agtgatagctggcggctatatgagtacattacccggcattttattgccactgtaagtcaa
gactgcaagtacctacaaaccactatagagttcagcattggcacagaggcattctcgtgt
agtggaagaacccttatatcaccaggttacacaactgtaatgccatggcagggcatccct
ctggaagagtccataccagtatgtgagcatggagacactttctcagtagatgagatcaag
ctgatagaaaagcaaaccagcccaccagactacctgactgaggctgaactcatcaccctc
atggagaaacatggcattggtactgatgctagtatcccagtccacatcaataacatctgc
cagaggaactatgtgacagttgaaagtggacgcaagctgaaaccaaccaacttaggcata
gtcctggtacatggctactacaagatagatgcagaactggtgcttcccactatacgcagt
gctgtggaaaagcagctgaaccttattgcgcagggtaaggccaactaccagcaggtccta
cagcacgccctggatatcttcaagaggaagtttcactactttgttgactccattaccaac
atggatgagttgatggaggtctccttttctcccattgctgctactgggaagccgctgtcc
cgctgtggcaaatgccaccgcttcatgaagtacatccaggccaagcccagcagactccac
tgctctcactgcgacgagacctacagtcttccccagaatggagccatcaagctttacaag
gagctccggtgtccactagatgactttgagcttgtgctgtggacttctggggcgcgggga
aagagctaccccctgtgcccctactgcttcagcaacccgccattcagggacatgaagaaa
ggtatgggatgcaatgaatgtacccatccatcatgtcagcactctctcaactccttgggc
attggacagtgtgtagagtgtgatagtggagttttagtgttggaccccacatctggacca
aagtggaggatggcctgtaataaatgcaatgtggtggtgcacttctttgaacatgcacac
aaagtgcaggttgctcaggagagctgtgatgtctgtgatgcctctctggttgcagtggac
tttaacaagactcgcactcctcttcctgccagtgagacccaacacactggctgtgttttt
tgtgatccagtgtttcaggatttggtggagctcaagcatgccaccatccggcattccatg
caccgtggtgggggtgggagaagaggaggacgtggacgtggacgtggacgtcgtggcaat
gctaaaaaacctaaagataaaatggctgccctagctgcttattttgtatag
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