Oreochromis niloticus (Nile tilapia): 100701899
Help
Entry
100701899 CDS
T06104
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X2
KO
K14298
mRNA export factor
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100701899 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100701899 (rae1)
03036 Chromosome and associated proteins [BR:
onl03036
]
100701899 (rae1)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100701899 (rae1)
Chromosome and associated proteins [BR:
onl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100701899 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Exonuc_X-T_C
Motif
Other DBs
NCBI-GeneID:
100701899
NCBI-ProteinID:
XP_003442704
Ensembl:
ENSONIG00000020323
UniProt:
I3KWW6
LinkDB
All DBs
Position
LG5:complement(30426687..30433681)
Genome browser
AA seq
368 aa
AA seq
DB search
MSLFGTSSGFGTGGTGVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNQNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttggaacaagctcggggtttgggactggagggaccggggtgtttggaagc
acgactacagacagccacaatcccatgaaggatgtcgaagtgacttcacctccagatgac
agcatcagctgcctggctttcagcccacccacaatgcctggaaacttcctcattggagga
tcctgggctaatgatgtccgatgttgggaggtgcaggacaatggacagactgttcccaaa
gcccaacagatgcacacaggtccagtgctggatgcctgctggagtgatgatggaagcaaa
gtcttcacagcttcctgtgacaagacagccaagatgtgggatctcaacagcaatcaagcc
atccagattgcacagcacgatggcccaattaaagcaatccactggatcaaggccccaaac
tacagctgtatcatgactggcagttgggataaaacactgaagttctgggatactcgatct
cccaatcctatgatgtcactgcagatgcctgagagatgctactgtgcagatgttgtgtac
cccatggcagtggttgccacagctgagagaggcctgatagtgtaccaactagagaaccag
ccctctgagtttcgcagaatagactctcctctcaaacatcagcatcgctgtgtggccata
ttcaaggacaagcagaacaagcctacgggttttgcactgggaagcattgaaggccgagtg
gcaatccactatatcaatcctccaaacccagccaaagataacttcaccttcaagtgccac
aggtccaatggaaccaacacaaccactccacaggacatctatgcagtgaatgccatcgcc
ttccatcctgtccatggcactctggctaccgtgggctcagacggacgcttcagcttctgg
gacaaagatgcccgcacaaagttgaagacctcagagcagctcgaccagcccatcacagct
tgctgcttcaaccaaaatggcaacatctttgcgtatgcttctagttacgactggtccaag
ggccatgagtactacaacccccagaaaaagaactacatcttcctgaggaatgccgctgag
gagctgaagcctcggaacaagaaatga
DBGET
integrated database retrieval system