Oreochromis niloticus (Nile tilapia): 100708465
Help
Entry
100708465 CDS
T06104
Symbol
aptx
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100708465 (aptx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onl03400
]
100708465 (aptx)
Enzymes [BR:
onl01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
100708465 (aptx)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
100708465 (aptx)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
100708465 (aptx)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
100708465 (aptx)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
100708465 (aptx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
zf-C2H2_6
zf-C2H2_4
DUF4467
Motif
Other DBs
NCBI-GeneID:
100708465
NCBI-ProteinID:
XP_019215729
LinkDB
All DBs
Position
LG6:19478657..19482546
Genome browser
AA seq
281 aa
AA seq
DB search
MIKCHFAGLSARREIINPSSSLIYRLLCWGEGQKQPSKTKNALGSKFKEDPTGSQSGTKR
QRESTTEDRESQRDTQSVKAAKQTERISVSVSHADSPKTNENAGHWSQGLKTSMQDPNMQ
VYKDDKVVVIKDKYPKARHHWLVLPWQSIPSLKALRTEHCDLVKHMQKVADQMIQQHPDC
SSVQFRTGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFIESKDVIQMLETDG
KVTVKEGTSELLKLPLRCHVCRKELLTIPALKEHLKSHFSR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatgccactttgctggcttatcagcgaggagggaaatcataaacccatccagc
tccctcatttacagactgttgtgttggggcgagggccagaaacaaccatcaaagacaaaa
aatgctctcggcagcaagttcaaagaggatcccactggcagccaaagtggaacaaaaagg
cagcgagagtccactacagaggaccgagagagccagagggacactcagagtgtgaaagca
gccaaacaaacagaaaggatctcagtgtcagtcagtcacgctgattccccaaaaacaaat
gaaaatgctggacactggagccaaggccttaagacatcaatgcaagaccccaacatgcag
gtgtacaaggatgataaagtggtcgtcattaaagataaataccccaaagctcgccaccac
tggcttgtgctcccgtggcagtcaattcccagcctgaaggctttgcgcactgagcactgt
gatctggtgaaacacatgcagaaagtcgctgaccagatgattcagcaacacccagattgt
agttcggtgcagttccgcacgggataccacgccatcccaagcatgagccatgttcacctc
cacgtgatcagccaagactttgactcgccttgtttaaagaacaaaaagcactggaactcg
tttacaacagattacttcatcgagtctaaggatgtcattcagatgcttgaaactgatgga
aaggtcaccgtgaaagaaggcaccagtgaattgttgaagctacctctccgctgccacgtg
tgtcgcaaagagcttctcactataccggcactgaaggaacacctgaagtctcatttttct
agataa
DBGET
integrated database retrieval system