Oreochromis niloticus (Nile tilapia): 100709340
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Entry
100709340 CDS
T06104
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1 isoform X2
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
100709340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
onl04040
]
100709340
Ion channels [BR:
onl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100709340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
100709340
NCBI-ProteinID:
XP_005471215
Ensembl:
ENSONIG00000033564
UniProt:
A0A669F322
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Position
LG7:complement(63265747..63287655)
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AA seq
1345 aa
AA seq
DB search
MFNWVVKVVPQPPDAVGTDDAAKTPDAPTKNTEAAVKTPTLKNADEVSEDGQAQTGVLGW
LSNGFVSALPQPAGTPRLSRANSEAKSGEDGDRSGVINWVTQGLTKVLPQPDDKYRETEK
DEEHTEVCDVATMPDFDPLPHIPVVEMVSDDEVSDTESLTPHFPPNVVTWIKQIVPQPVI
LPPGAVPVEPSTKSSRTSLDKILSPPPESLSGISLDTESKASGVVNWFVSGLGLKMPQPV
SPSKDEAHTVPEVIQKASAKLKPDMVLEDVESDNEGQQKRADPPKAQAPSASLVPPSPAT
QQQQEVTQSSQSLSVESQKCSDAPPKPQPSESATKVSLEDAETQTGRWTPFIENIKKEAE
GVALATMEERLLQERMEMARMAEEVARQTAEMAIRQMASEGQSIKLSLGSQELLEEPEAE
LPVPLEEESEVEISKAPEKNESLRQEEKKVETEEPTVNEPEPQEEASTSPPPSSEPVEIS
EPKPEQAPEAEAETKTSEAPPEAEPITEQPQKNEDDGQTANADKAPEKEEEATGDDCGES
SNISLRPAVNVEDVDSDHEKGGGAKGGGGGGEGEEQIPQILTPQDPKLTTLTVPVTPSGG
RQSKGDKDSGRNHRSVWTKIRRLHSESEDDDEEGNTPVRAWPSQSSLHSTDDVLKERPAS
SASQTSTVVNERLQELVRMFKERTEKAKEKLIDPDSSDEDSIITSPPQPPAAQLAPGAQP
PDEKETQAGPSGGGGVESGTEEEHPGRCCKVKTPWWIRACVRFRFPASIDPFTNLMYVLW
MFLVSLAWNWNVWFIPVRWAFPYQTPDNIYYWLLTDYLCDLIYILDIAVFQPRLQFVRGG
DIVCDTKEMRKNYMKTKRFKFDVASLVPLELFYFKTGINPLLRLPRLLKINSFFEFNDRL
EAILTKAYIYRVIRTTTYLLYCLHFNACLYYWTSDFIGLGLTQWVYNGEGNSYIRCYYFA
VKTLITIGGLPDPTTLSEIIFQLINYFIGVFAFSIMIGQMRDVVGAATASQTYYRSCMDS
TIKYMSSYRIPRDVQNRVKTWYNYTWQSQGMLDEQELLNQLPDKMRLDIAIDVNYSIVSK
VPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVF
VTLRAGSVFGEISLLAVGGGNRRTANVIAHGFANLFILDKKDLNEILVHYPESKKLLRKK
ARKMLNKGKKPESKEEAKEPPQVPAAPVRAETPKLLKAALEMTERSSGLKGALAKVKEKT
NKSSISLQPSISSPLPPPSPASSLEPDREVDTPSPMSAGSPTFRSASRCRYSAMPQSPSV
CHSDTVTKEPIGDDEGNGKRKEKKS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggttccccagcctcctgatgctgttgggacagacgat
gctgccaagacccctgatgctccaaccaaaaatacagaggctgcagtgaagacacccaca
ctgaaaaatgcagacgaggtttcagaggacggccaagcgcagactggagtattaggctgg
ttgtctaatgggttcgtcagcgcgctcccacagcctgcgggcaccccccgactcagcaga
gccaactctgaagccaagtccggagaagatggagacaggtctggagtgatcaactgggtc
actcagggtctgaccaaagtgctgcctcagcctgacgacaagtacagagagactgagaag
gacgaggaacacacagaggtgtgtgacgtagccacgatgccagatttcgacccacttccc
cacatccctgtggtggagatggtgtcagacgacgaggtgtcggacacagagagtttgaca
cctcactttcctcccaatgtggtgacctggataaagcagatagttcctcagccggtcata
ctgccccctggtgctgtgcccgtggaaccgtcaaccaagtcctcccgcacgtctctggat
aaaattctgtctccaccacctgaatcgctcagtggaatctcactggatactgaaagcaag
gcctctggtgtggtgaactggtttgtgtcagggctgggtctgaagatgcctcagcctgtt
tctccatccaaggatgaagctcataccgtacctgaagtcattcagaaagcatcagccaaa
ctcaaaccagacatggtgctggaagacgtagagtcagacaacgaggggcagcagaaacgt
gcagatcctcccaaagctcaagctccgtctgcatccctggttccaccatcacccgcaacc
cagcagcaacaggaagtgacacaatcctcacagtcgctttcagtggagtcacagaaatgc
agtgacgcccctccgaagccacagccatcagagagtgccacaaaagtatctctggaagat
gcagagacccagacaggccgctggacgccgtttattgaaaacatcaagaaggaggctgaa
ggggtggcgttggctaccatggaggagcgtctgcttcaggagaggatggagatggcccgg
atggctgaagaggttgccaggcagacagctgagatggctattagacagatggccagtgag
ggacagtccatcaagctctcactggggagtcaagaactgctggaggagcctgaagctgag
ctgccggtgccgctagaagaggagagcgaggtggagatcagcaaagccccagagaagaac
gagagccttcgtcaggaggagaagaaagttgagactgaggagcccaccgtcaacgagcca
gagccgcaggaggaagcctcgacctcaccgcctccaagcagtgagccagtggagatttct
gagcctaagccagaacaagcaccagaagcagaagcagaaaccaagacctcagaagctcct
ccagaagctgagcccatcactgagcagccgcagaaaaacgaagacgacggtcaaactgct
aacgctgacaaggctcctgaaaaggaggaggaagctactggggatgactgcggtgagagc
tccaacatcagccttcgcccagctgttaatgtagaggatgttgactctgatcatgagaag
ggaggaggagcaaaaggaggaggaggaggaggagaaggggaagaacaaatcccccaaatc
ctcaccccacaggacccaaagcttacaaccctcactgttcctgtgaccccttcaggaggt
cgtcaaagtaaaggagataaagatagtggaaggaatcacaggagtgtctggacaaagatc
aggaggcttcattctgaaagtgaggatgacgatgaagagggaaacacccccgtcagagcc
tggcccagccagtccagcctgcacagcacagacgacgttctgaaagaacgtccagcatct
tctgccagtcagaccagcacggtggtcaacgagagacttcaggagctcgtcaggatgttc
aaggagagaacggagaaggccaaggagaaactcatcgacccagacagctcggatgaagac
agcattatcacctctcctcctcagcctccagctgctcagctcgctcctggagctcagccg
ccagatgagaaagagacgcaagcaggtccgtcaggaggcggaggagtagagagtggaaca
gaggaggagcatcctggccgttgctgcaaggtgaaaacaccttggtggatacgagcctgt
gtgcgattccgtttccccgccagcatcgaccctttcaccaacctgatgtacgtgctgtgg
atgtttttggtatctctggcctggaactggaacgtgtggttcatcccggtgcgctgggcc
ttcccctaccaaaccccggacaacatttactactggctgttaaccgactacctgtgtgac
ctcatttacatcctggacatcgctgtttttcagccgcgcctgcagtttgtgcgtggaggg
gacatagtgtgtgacacaaaggagatgagaaagaattacatgaaaaccaaacgtttcaag
tttgatgtggccagccttgttccccttgagctcttctattttaaaactggcatcaaccct
ctgcttcgcttaccacggctgctgaagatcaactccttctttgagttcaatgatcgtctg
gaggccatcttgaccaaagcctatatctacagggtgattcgtaccaccacctatcttctt
tactgtctgcactttaatgcctgtctctactactggacctctgacttcataggactggga
ctgactcagtgggtgtacaatggcgagggtaacagttacattcgctgttactacttcgca
gtgaagaccctgattaccattgggggtctgccagatcccaccaccctgtctgagatcatc
ttccaactcatcaactactttatcggagtctttgctttctcaatcatgattggacagatg
cgtgatgttgttggtgcagctacagcaagtcaaacctactaccggagctgcatggacagc
actattaaatacatgtcctcctaccgcatcccgagagacgtccagaaccgtgtcaaaacc
tggtataactatacctggcaatcacaaggcatgctggacgagcaggagctgctgaatcag
ctgccagataaaatgcgtctggacatagcgatagatgtcaactactccattgtgagcaaa
gtccctctttttcagggttgtgacagacagatgattttcgacatgctgaaaagcctgcgc
tctgtcgtctacctcccaggggattatgtctgcaaaaagggcgaggtgggtcgggagatg
tatatcataaaggcaggagaggtgcaggtggttggaggcccagatgggaagactgtattt
gtcactcttagagcgggatcagtctttggagaaatcagcttgcttgcagtcggcgggggt
aacaggcgcacagccaatgtgattgctcatggctttgccaatctattcatcctggacaaa
aaagacctgaatgagatcctggtccactatccggagtccaagaaactgctgcgcaagaaa
gccaggaagatgcttaacaaaggaaagaaacctgaatctaaagaagaggctaaggaaccc
cctcaggtaccagcagctcctgtcagggcagagacgcccaaactgttgaaagcagctctt
gagatgacggagagatcgtcgggacttaaaggagctttggcaaaagtcaaagagaagacg
aacaagtccagcatctccttacagccgtcgatctcctcccccctcccccctccatccccc
gcctccagcttggaacctgacagggaagtggacacgccgtcacccatgtctgccggctct
ccgacatttcgctctgcttcccggtgtcggtactctgcgatgcctcagtcaccctctgtg
tgccacagtgacacagtcacaaaggagccaatcggtgatgatgaaggaaacgggaagagg
aaagaaaaaaagtcgtga
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