Oreochromis niloticus (Nile tilapia): 100710370
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Entry
100710370 CDS
T06104
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
onl
Oreochromis niloticus (Nile tilapia)
Pathway
onl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100710370 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onl03019
]
100710370 (exosc5)
Messenger RNA biogenesis [BR:
onl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100710370 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100710370
NCBI-ProteinID:
XP_003459176
Ensembl:
ENSONIG00000037177
UniProt:
A0A669DMI8
LinkDB
All DBs
Position
LG14:33453211..33458749
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AA seq
232 aa
AA seq
DB search
MTPSACDKSAFSTMEVCGSLTVSLREFGCEQSLLSRPDGSASFVQGDTSVMAGVYGPAEV
KVSKEIYDRATLEVLVQPKVGLPSVRERSQEQCVRETCEASLLLTLHPRSSLTLILQVLH
DDGSLLSCCLNAACMALMDAGLPMSCLFCGVTCAISTDGQIITDPTAAQEKESRALMTFA
IDSAKHSVLMSSTKGSFSVHELQQCIAVSQKASEKIFQFYRDSVKRRYSKSL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacgccatccgcctgcgacaaatctgctttctccacgatggaggtctgcggctccctg
actgtttctttgagagagtttggttgtgaacagagcttgctgtctcgacctgatggctct
gcttccttcgtccaaggagacacgagtgtgatggctggagtgtacggaccagctgaggtc
aaagtcagcaaggagatctatgaccgggcgaccctggaggtgttggtacagcccaaagtg
gggttgccaagtgtaagggaacgatcacaagagcagtgtgtgcgagaaacctgtgaggct
tctctgctcctgacgctccatccacgctcctcgctcactctcattcttcaggtcctgcat
gatgatggttcactgctgtcttgctgtttgaatgctgcatgtatggctcttatggatgca
ggattgcccatgagttgcctcttctgtggagtgacttgtgccatcagcacagatgggcaa
atcatcacagatcccactgcagctcaggaaaaggaaagtcgagctttgatgacttttgcg
atcgacagcgcaaaacacagcgttttgatgtcgtcgaccaaaggatcgttttcagtgcac
gagctgcagcagtgcatagcagtcagtcagaaagcatcagagaagatcttccagttctac
agagactctgtcaagcggcgatactccaaaagcctatga
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