Oreochromis niloticus (Nile tilapia): 102080219
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Entry
102080219 CDS
T06104
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
onl
Oreochromis niloticus (Nile tilapia)
Brite
KEGG Orthology (KO) [BR:
onl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
onl03400
]
102080219 (ap5b1)
DNA repair and recombination proteins [BR:
onl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
102080219 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
102080219
NCBI-ProteinID:
XP_005452320
Ensembl:
ENSONIG00000003364
UniProt:
I3J5U5
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All DBs
Position
LG5:complement(39024354..39029533)
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AA seq
942 aa
AA seq
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MAANWAERISAFSRRPSGFLSGTTAEAFLAELLRELRDDRATYSVKILLLSPLCEHSTLL
CCSDSVGEETALELMSVFVQCPPKSVQFRCHLLLALTSVLICTSCVKSHSRASLDFLDVL
LQIAQDTSDIHTDGRQRPLRATACECLRELEACCPGLLSQRLELLGGLRQQETSRLHQAY
AELYTLVLRNAIYQLTQETGAGAEHLKALLGGNTSAAWEADQESDLTSSKDSAILSSLIL
GPMGTVPTLHTGPDCKELRSVLSTLLDESYLLTPLCQATLLHRLTEVVAMVPGVPPAIFR
THLLRLLGTSEVSLLHATLLLKCAFTDSLFSSEDEAFILKRLVVLSQHPLLSTPEKLFYM
DCILHFPENRPISCSDGDETLPVLLTPQLASALVPTVFNDSTTLLARFNMLSLVYLEEGE
EGQGGQGLAYLYEHLSSLLSMVENGCSRELVVTFFRAAFLFLYYFCHVERYSNDLTKQLC
QLYFHHTKLAPHLINLADQTQDRLSESSWSVGLLKALQRVITEAPLTQLTSHDLSRHLKM
LVRVADEGEIIQQSTLTFLSSIITPSSSSLCTGGDWRLGNDILRVCRRLLVHPSLDSLLT
PLADVLHLICHYADMEIQDHARLYYTLLTTLSREKLAGVLAQGMEEGGRQVKKQSLSCLM
GEGLTSTLTIQQTERAVFRLIEAPPEPRAGDINSNEVETGPGEASALVEAYRDQFSDSSF
ASEITLQYQLVHINSHDCHFDQLFSIRLHFSLTDHHYEELGDISVPCLLRERPSTIVQLT
LKPRKPYPTSLHASAIFTSPDGRTWHTTLPDIHVAFQQTFLPLPVPSSWGRGGTLSVFEG
LWDEICSESGDSATSLFCCQLKEAALNTLVEKHFLPFLISDLSHKEEFKVLFFLPPRSHI
LLKVSSEEDAVHFNIATDNWELLSHINSYLLKVTSLQEDTLS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaactgggccgagaggatttctgctttctcccgcagaccgtccggcttcctc
tccgggaccaccgcggaggctttcctggcggagttgctccgagagctccgcgatgacaga
gccacttacagcgttaagatcctcctgctatcgccgctgtgtgagcactcgaccctgctg
tgttgttcggactctgtgggtgaggagacagccctggagctcatgtcagtattcgtccag
tgtcctcctaagtctgtccagtttcgttgtcacctcctcctggctctcacctcggtcctc
atctgcacttcctgtgtgaagagccactcccgtgcatctctagactttctggatgtgctc
cttcaaatagcccaggacaccagcgacatccatacggatggcaggcagcgtcctcttcgg
gcaacagcctgcgagtgcctgcgggaactggaggcctgctgccctggcctcctctcccag
cgccttgagctcttgggtgggctccggcagcaggaaacatcaaggctccaccaggcttac
gcagagctttacactctggtgttaagaaatgccatctatcagctcacccaggaaacagga
gctggtgctgagcaccttaaagcccttctgggagggaacacatcagctgcatgggaagca
gaccaggagtcagacctgacaagcagcaaggactcagccatactgtcttctctcatcctg
ggacccatgggtacagtaccgactctgcacaccggccctgactgtaaggagctgcgatca
gtcctctccaccctcctggatgagtcctacctgctcactcctctgtgtcaggctacacta
ttacatagactgacagaggtggttgccatggtgcctggagtccctccagctatattcagg
actcacctgctgcggctcctgggcaccagtgaggtgagcctccttcatgccactctgctg
ctgaagtgtgccttcacagacagcctgttcagctctgaagacgaagccttcatcctcaaa
cggctggtggtgctctcccagcacccgctcctgagcacgcctgagaaactcttctacatg
gactgcatcctgcacttcccggagaaccggcccatcagctgcagcgacggtgacgagacc
ctccccgtgctcctcacgccgcagctcgcttcagctctggtgcccaccgtgtttaatgac
agcaccaccctgcttgcccggttcaacatgctatccctagtgtacctggaggagggggag
gaaggccagggaggccaggggctggcctacctctacgagcacctgagctcgctgctgagc
atggtggagaacggatgcagcagagagctcgttgtcaccttcttcagagcggccttcctt
ttcctgtattatttctgccacgtggagcgctactccaacgacctgaccaagcaactgtgt
cagctctacttccaccacaccaagctggctccacatctcatcaacctggctgaccagacc
caggacagactgtctgagtccagctggtctgtggggctcctcaaagctctgcagagggtc
attactgaggctccactcacccagctcacctcacacgacctcagccggcacctcaagatg
ctggtccgagtggcggacgaaggagagatcatccagcaaagcaccctcaccttcctctcc
agcatcatcacaccctcgtcatcctcattgtgcacaggtggcgattggcgtctgggaaac
gacattctcagggtctgccgccgtctgctcgtccacccaagtctggattcactgctgact
cctctggctgatgtcctgcacctcatctgccactacgcagacatggagatccaggaccac
gcccgtctctactacaccctcctgaccacgctgtcaagggagaagctggctggggtgttg
gcacagggcatggaagagggagggcgtcaggtcaagaagcagtcactgtcctgcctcatg
ggtgaggggctgacaagcacactgaccatccagcagacagagagagctgtattcaggctg
atcgaggcccctcctgagccacgagcaggagacataaattcaaatgaagtggagacaggc
ccgggggaggcaagcgcattggtggaggcctacagagatcaattcagtgactccagcttt
gcttcagagatcacattacagtaccagctggtccacatcaactctcacgactgccacttt
gatcaactcttcagcatccgccttcacttcagcctcacagaccatcactacgaggagctg
ggcgacatcagcgtcccgtgtcttctgagagagaggccgtcgaccatagttcagctcaca
ctgaagcccaggaagccttaccccaccagcctccacgccagcgccatcttcacctcccca
gatggccgtacgtggcacaccaccctacctgacatccacgtggctttccagcaaactttc
ctgcctctgcctgtcccctcaagctggggacgaggtggcacactgagcgtgttcgagggt
ttgtgggacgaaatctgctcagagagcggagacagtgctacgagcctattctgctgccag
ctaaaggaagcagctctgaatacactggtggaaaagcacttcctccccttcctcatatca
gacctgtcgcataaagaagaattcaaagtgctcttcttcctcccaccacgctctcacatc
ctgttgaaggtaagctcagaggaggacgccgtgcacttcaacattgccacggataactgg
gagcttctgtcacatattaactcttaccttctaaaagtcacatcattacaggaagacacg
ctcagctga
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