Ostrinia nubilalis (European corn borer): 135080497
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Entry
135080497 CDS
T10851
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
onu Ostrinia nubilalis (European corn borer)
Pathway
onu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
onu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135080497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
onu03019
]
135080497
Enzymes [BR:
onu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
135080497
Messenger RNA biogenesis [BR:
onu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
135080497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
MMR_HSR1
AAA_10
AAA_21
ATP_bind_1
AAA_16
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
135080497
NCBI-ProteinID:
XP_063831198
LinkDB
All DBs
Position
18:2065511..2083556
Genome browser
AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLDPDSELRFEVESKNEKVVLEVKSGYAELFGTELVKGKPYEFHTGAKVAV
FTWHGCTVELRGRTEVSYVAKETPMVVYLNVHAALEQQRVAAEQENTRGPVTMVVGPGDV
GKSTLTRILLNYAVRMGRRPIFVDLDVGQGNISIPGTIGAMLVERPASIEEGFSQQAPLV
YHFGHKSPGENLELYNTIVSRLAEVITERCENNKKAATSGVIINTCGWIKNAGYKVLTHA
AQAFEVDVILVLDNERLFIELKRDMPKFVKVVYLPKSGGVVERSDTQRAESRDARVREYF
YGKRTPYYPHSFDVKFSDLKIYKVGAPSLPTSCMPLGMRAEDALTKLVGVPAGAALAHRV
LAVSFAAAPDDDVLHTNLAGFVCVTAVDTERQTLTVLSPQPRPLPNTILLLSDLQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtgcagttgcaagaattcaaattggacccagactcagagctacgttttgag
gttgaatcaaagaatgaaaaagtagttttagaagttaagagtgggtatgcagagttattt
ggtacggagctggtgaaagggaagccttacgagttccacacgggggcgaaggtagccgtg
ttcacgtggcacggctgcacggtggagctccgggggcgcactgaagtcagttacgtggcg
aaagaaactcctatggttgtctacttaaatgtgcacgcagcacttgagcaacagagggta
gcggcggaacaagaaaacacacgcggccccgtgaccatggtggtgggtcccggagacgtg
ggaaagtccacgctgacgcggatcctgctcaactacgccgtgcggatgggtcggaggcct
atatttgttgatttggatgttggtcaaggaaacattagcatcccaggaactataggtgca
atgctggtagaaaggcctgcgtctatcgaagaaggtttcagccaacaggcaccgctggtg
taccactttggccacaagtctcccggggagaacctggagctttacaacaccattgtctcg
cggctagccgaagtcatcaccgaaaggtgtgaaaacaataagaaagcggcaacttcagga
gttataatcaatacatgtggctggattaagaatgccggttacaaagttctcacacatgca
gcgcaagcttttgaggttgacgttatcctagtcctagacaatgaaagactgttcattgaa
ttgaagagagacatgccaaagttcgtcaaagtggtctacctgccgaaaagtggaggtgtc
gtggaacggtcagatacgcagcgagcggagagccgtgacgctcgagtgagagaatacttc
tacggcaagcgcacaccctactacccgcattccttcgacgtcaagttcagcgatctcaag
atatacaaggtgggcgcgccatccctgccaacatcgtgcatgccgctgggcatgcgtgcc
gaggacgcgctgaccaagctcgtgggcgtgcccgcgggagccgcgcttgctcaccgcgtg
ctcgccgtgtccttcgcggctgcgcccgatgatgacgtattacatacaaacttagctggc
ttcgtgtgcgtcacggcagtagacacggagcggcagacgctgacggtgctgtcgccgcag
ccgcgcccgctgcccaacaccatcctgctgctgtccgacctgcagtacatggacaaccac
tag
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integrated database retrieval system
