Oenococcus oeni: OEOE_1375
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Entry
OEOE_1375 CDS
T00408
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ooe
Oenococcus oeni
Pathway
ooe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ooe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OEOE_1375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ooe03021
]
OEOE_1375
03400 DNA repair and recombination proteins [BR:
ooe03400
]
OEOE_1375
Enzymes [BR:
ooe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OEOE_1375
Transcription machinery [BR:
ooe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OEOE_1375
DNA repair and recombination proteins [BR:
ooe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OEOE_1375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ABJ57237
UniProt:
Q04E85
LinkDB
All DBs
Position
complement(1282812..1286405)
Genome browser
AA seq
1197 aa
AA seq
DB search
MVTHNVKINKHVTRRSYSSAKEVLEIPPLTEVQTASYKWFMDKGIKEMFNDIMPIEDFAG
KLSLEYVDYSLGEPKYSLKESREQAVNYAAPLHVTLRLTNKETGEIKSQDVYFGEFPLMT
EYGSFVINGAERVVVSQLVRSPGIYYNEDTDKTGRVVYGTTVIPNRGAWLELDTDAKGVA
NIRIDRTRKLPITELIRSFGFGSDSEIQDIFGDEIDSLNLAIEKDVHKDPSMSRVGEALE
DIYERLRPGEPKTIDSSRSLLAARFFDPKRYDLGNVGRYKVNKKLSLKSRLLGQTLAEDI
LNSDGEVVVPKDTKIDKKSMKLISPLLDEEDFHVENLQPDEEGVLPDPIKVQTIKIFSQV
DPTKVIKLIGNGHIDESIHHILPADIIAGMNYFFNLQEGVGATDDIDHLGNRRIRSVGEL
LENQFRIGLTRMERVVRERMSIQDSDTVTPQQLINIRPVVAVVKEFFGSSQLSQFMDQTN
PLGELNHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRIDPIETPEGPNIGLITSLAVYG
RINEYGFIETPYRRVDWDTHKVTDKIDYLTADVEDNYTIAQANSPLNDDGSFTNPTVTAR
HGDNNIETPIEDVDYMDVSPKQVVAVSTAAIPFLENDDSNRALMGANMQRQAVPLVAPHS
PIVGTGIEYRAAVDSGLAQIAEEKGTVEYVDGRTIKVREEDGTLHEYPLMKFQRSNGGKN
YNQTPIVKVGEKIEKGEVLADGPAMENGELALGQNPVIAFMTWHGYNFEDAIVLNERLVR
DDVYTSIHIEEHESEARDTKLGPEEITREIPNVGEDQLKDLDDSGIIRIGAEVEDGDILV
GKITPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIQDVEIFTRENGDELAP
GVNMMVRVFIAQKRKIQVGDKMAGRHGNKGTVSVVVPEEDMPFMPDGRPIDILLSPMGVP
SRMNIGQILELHLGMAAKKLGIKIMTPVFDGASDDEIIDALKEAGLDEDGKTVLYDGQTG
EAFDNRISVGVMHYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTYKSDDVRGRNKVFESIVKGQAIPKPGVPESFRVLVKELQALGLDMK
VLNGKGQEVKMAQMDEDDNVATVDALEQIAKEKPDLFKGDDDDTPRIPATKLDEENV
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
ttggttacacataatgtgaagataaataagcatgttactcgacgcagttactcttctgct
aaagaagtgcttgaaatcccaccgttgaccgaagtccagactgcctcttataagtggttt
atggataaaggcattaaagaaatgttcaatgatatcatgcctatcgaagattttgccggc
aagctatcacttgaatatgtagattactcattaggagaacctaaatattcgttaaaggaa
tcacgcgaacaagccgttaactatgcggctccactgcatgttactcttcgtttgacgaat
aaagaaactggcgaaattaagtctcaggatgtttattttggcgaatttccattaatgacc
gaatatggttcctttgtgattaatggagccgagcgtgttgttgtatcgcagcttgttcgt
tctccgggaatttattacaacgaagataccgataaaaccggtagagttgtttatggaact
acggttattccaaaccgtggtgcttggttggaattggataccgatgccaaaggcgttgct
aatattcgaattgaccgaacccgtaaacttccgattacggaattaattcgttcctttggt
tttggctctgattcggagatccaagatatctttggcgacgagatagattctttgaatttg
gcaattgaaaaagatgttcataaagatccttcgatgtctagagtcggtgaagccttggaa
gatatttacgagcgtttgcgtcccggtgaaccaaaaacgattgattcgtctcgttcacta
ttagcggctcgtttctttgatccgaaacgttatgatcttggcaatgttggtcgctacaag
gtcaataaaaaactttctctgaaatcccgtttgttgggtcagactttagctgaagatatt
ttgaattccgacggcgaagttgttgttcctaaggacacgaagattgataagaaaagtatg
aaactgatttctccactactcgatgaagaggattttcacgttgaaaatctgcaacctgat
gaagaaggagtcctgcccgatccgattaaagttcagacgattaaaatattcagtcaggtt
gatccgactaaagttattaaattaatcggaaatggtcacattgacgagtcgattcatcac
attcttcctgccgatattattgccggcatgaactatttcttcaatctccaagagggagtc
ggcgcgactgacgatatcgatcatttaggcaatcgtcgaattcgttcggttggcgaactg
cttgaaaaccaattccgtattggcctcacgcgaatggaacgtgttgtccgcgaacggatg
tcgattcaagattccgacactgttacaccgcaacaattaattaatattcgtccggttgtt
gccgtagtcaaagagttctttggttcttcacaactttctcaattcatggatcaaaccaat
ccgcttggcgaattgaaccataagcgtcgtttgtctgccttgggacctggtggactgact
cgtgatcgtgctggttatgaagttcgtgatgttcattattctcattacggccgtattgat
ccaattgaaactccagaaggcccaaacattggtttgattacctctttggctgtctatgga
cggatcaacgaatatggttttatcgagacgccttatcgccgtgttgattgggatacccat
aaagttaccgacaagattgattacttgactgccgatgtcgaagataattacacgattgct
caagctaactctccgttaaatgacgatggatctttcacaaatccaactgttaccgctcgt
catggcgataacaatattgaaacgccaattgaagatgtcgactacatggatgtttctcca
aaacaggttgttgctgtttcgacagctgcgattcctttccttgaaaatgatgattccaac
cgtgctttaatgggggccaacatgcagcgtcaggctgttcctttggttgctccgcattct
ccgatcgttggaaccggaattgaatatcgtgcagcggtcgattccggattagcacaaatt
gccgaagaaaagggcacagtcgaatatgttgatggccgaacaattaaagtccgcgaagaa
gatggaactctccatgaatatccattaatgaaattccagcgctcgaatggcggaaagaat
tataaccagactccgattgttaaagttggtgaaaagattgaaaaaggtgaagtgcttgcc
gatggaccagcaatggaaaatggtgaacttgctcttggacaaaatccggttatcgccttt
atgacttggcatggatataacttcgaagatgcaattgtcttaaacgaacgactggtccgt
gacgatgtgtacacatctattcatatcgaagaacacgagtctgaagcacgtgatacaaaa
cttggacctgaagaaattactcgtgaaatccctaacgttggtgaagaccaattaaaggat
cttgatgattccgggattattcgaattggtgccgaagttgaagatggagatattttagtt
ggaaaaattactccaaagggtgtaacggaattatcagccgaagaacgtttactccatgct
attttcggtgaaaaggcccgtgaagttcgtgatacttctttgcgtgttcctcacggtggt
ggcggaattattcaggatgtcgaaattttcactcgagaaaatggcgatgaattggctcct
ggagttaatatgatggtccgggtcttcattgctcaaaaacgtaagatccaagtcggtgat
aagatggctggccgccatggaaacaaaggaactgtttcggttgttgtcccagaagaagat
atgccgtttatgccggatggcagaccaatcgatattctcctttctccaatgggtgttcca
tcccgtatgaatatcggacagattttggaacttcatttgggcatggcagctaaaaaactt
ggtattaaaattatgactcctgttttcgatggagcttctgatgatgaaattatcgatgct
ctaaaagaggctggacttgacgaagatggcaagacagttctttatgatggacagaccggt
gaagccttcgataaccgaatctctgttggtgttatgcattatatgaaactggctcacatg
gttgacgacaagattcacgctcgttcaattggaccatattctcttgttacgcaacagcct
ttgggtggtaaagcccaattcggtggacagcgttttggtgaaatggaagtttgggctctt
gaagcctatggtgctgcttacactttgcaggaaattcttacctataagtctgatgatgtt
cgcggtcgtaataaggtctttgaatctatcgttaaagggcaggcaattccaaagcccggc
gttccggaatctttccgtgttcttgttaaagaactgcaggcgcttggacttgatatgaag
gtcctcaatggcaaaggccaagaagtaaaaatggctcaaatggatgaagacgataatgtt
gcgacggttgatgcattggaacagatcgctaaagaaaagcctgatttgtttaaaggagac
gatgacgatacgccacggattccagcaacaaaacttgatgaagaaaatgtttaa
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integrated database retrieval system
