Otariodibacter oris: A6A10_00040
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Entry
A6A10_00040 CDS
T06287
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ooi
Otariodibacter oris
Pathway
ooi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ooi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A6A10_00040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ooi03021
]
A6A10_00040
03400 DNA repair and recombination proteins [BR:
ooi03400
]
A6A10_00040
Enzymes [BR:
ooi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A6A10_00040
Transcription machinery [BR:
ooi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A6A10_00040
DNA repair and recombination proteins [BR:
ooi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A6A10_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
Cas_Cas2CT1978
Motif
Other DBs
NCBI-ProteinID:
QGM79907
LinkDB
All DBs
Position
7693..11721
Genome browser
AA seq
1342 aa
AA seq
DB search
MAYSYSEKKRIRKSFGKRSQVLNVPYLLTIQLDSFDKFIQRDPEGQQGLEAAFRSVFPIV
SNNGSTELQYVSYELGEPSFDVRECQIRGTTYAAPLRVTLRLVTFDREAAAGTVKDIKEQ
SVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHASGKVLYNARIIPYR
GSWLDFEFDPKDNLYARIDRRRKLPATIILRALGYTTEEILDLFFDKIHFEIKDNQLLMT
LVPERLRGEIAAFDIEANGKVYVENGRRITARHIRALEKDNITQIVVPTEYIVGRVTAKD
YIDLETGEVVCPANMEISLEMLANLAQAGYNEIEVLFTNDLDYGPYISETLRVDPTHDRL
SALVEIYRMMRPGEPPTKEAAEGLFDNMFFSTDRYDLSAVGRMKFNRSLDIPEGVGTGIL
SNDDIVGVMKKLIEIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVRERLS
LGDLDGVTPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHATHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRKVVDGQVT
EEIEYLSAIEEGNYVIAQANSNLDDDFRFTDTYVTCRGEHGESGLYRPEEIHYMDVSTQQ
VVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGIEKAVALDSGVAVVAK
RGGTIQYVDASRIVVKVNEDETIAGEAGIDIYNLIKYTRSNQNTCINQLPCVQLGEPVER
GEILADGPSTDLGELALGQNIRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCV
ARDTKLGAEEITADIPNVGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEE
KLLRAIFGEKASDVKDSSLRVPNGTSGTIIDVQVFTRDGVEKDKRAKEIEEMQLRDAKKD
LVEELEILEAGLFTRVRNLLIEGGVAESTLDNLPREKWLEQTLDDEAKQNQLEQLAEQHE
ELRKEFERKLEVKRNKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKI
NPVEDMPYDENGQPVEIVLNPLGVPSRMNIGQILETHLGLAARGIGDQINQMIKQQQSIA
KLREYIQKAYDLGHGAQSVDLNTFSDEEVLRLAENLRKGLPLATPVFDGAHEDEIKGLLE
LGGLPTSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGTHYMEPGMP
ESFNVITKEIRALGIDMELDEA
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatattccgagaaaaagcgtattcgtaagagcttcggcaaacgctcacag
gttcttaatgtaccttatctattaacaattcagcttgactcttttgataaatttattcaa
agagaccctgaaggacaacaaggtttagaagcggcattccgttcagttttcccaattgta
agtaacaatggttcaactgaattacaatacgtttcatacgaacttggcgaaccatcattc
gatgttcgtgaatgtcaaattcgtggtacaacttatgctgcaccactccgcgttacatta
cgcttagttaccttcgaccgtgaagccgcggcaggtactgtaaaagatattaaagaacaa
agtgtatatatgggagaaatcccactgatgactgataacggaactttcgttatcaatggt
acagagcgtgtgattgtttcacaattacaccgtagcccaggtgtgttctttgattcagac
aaaggtaaaacgcacgcatcaggtaaagtcctttataacgcaagaattatcccttaccgt
ggttcttggttagattttgaattcgatccaaaagataatctttacgcgcgtatcgaccgt
cgtcgtaaattaccagcaacgattattttacgtgcattaggctacacaacagaagaaatc
ttagatttattcttcgataaaattcattttgaaattaaagataatcaattattgatgacc
cttgtaccagagcgtttacgtggtgaaattgctgcgtttgatattgaagcgaatggtaaa
gtttatgtagaaaatggtcgtcgtattactgcccgtcatattagagcattagaaaaagat
aatattactcaaattgttgttccaacagaatatattgttggtcgtgtgactgcgaaagac
tatatcgatcttgaaacaggtgaagtagtttgccctgcgaatatggaaatttcattagaa
atgttggcaaaccttgctcaagctggctataacgaaatcgaagtattattcacaaacgat
ttagactacggtccttatatttctgaaacattacgtgtggatccaactcacgatcgttta
agtgcgttagttgaaatttaccgtatgatgcgtccaggcgagccaccaacaaaagaagca
gcagaaggcttgtttgacaatatgttcttctcaactgaccgctatgatctttctgcggta
ggtcgtatgaagttcaatcgttctcttgatattccagaaggcgtgggcacaggaatttta
agcaacgatgatattgtcggtgtgatgaaaaaattaatcgagatccgtaatggtcgtggt
gaagttgatgatatcgatcacttaggaaaccgtcgtatccgttctgtgggtgaaatggca
gaaaaccaattccgtattggtttagtgcgtgttgagcgtgcagtgcgtgagcgtctttca
ttaggcgatttagatggcgtaactccacaagatttaatcaatgcgaaaccaatttcagca
gcagtgaaagagttctttggttcatcacaactttcacaatttatggaccaaaataaccca
ctttcagaagtgacacataaacgtcgtatttctgcattaggcccgggtggtttaactcgt
gaacgtgcaggctttgaggttcgagatgttcacgcaactcactatggtcgtgtatgtcca
atcgaaacacctgaaggtccaaacatcggtttgatcaactcactttctgtgtacgctcgt
actaacgactacggtttcttagaaacgccatatcgtaaagtggttgatggtcaagtaaca
gaagaaatcgaatacttatcagcaattgaagaaggtaactatgttatcgctcaggctaac
tcaaacttagatgacgatttccgctttactgatacttatgtaacttgtcgtggtgaacac
ggtgagtctggtttatatcgtccagaagaaattcactatatggacgtttctacacaacag
gtagtttctgttgcggcagcgttgattccgttccttgaacacgatgatgcgaaccgtgcc
ttaatgggtgcgaacatgcaacgtcaagcagtaccaacactacgtgcggataaaccatta
gtcggtacaggtatcgaaaaagctgtagcacttgactctggtgtagcggttgttgcgaaa
cgtggtggtacaattcaatatgttgatgcgtcacgtatcgttgttaaagttaatgaagac
gaaactatcgcgggtgaagcgggtatcgatatttataacttaattaaatatactcgttca
aaccaaaacacttgtatcaaccaattaccttgtgtgcaattaggtgagccagttgaacgt
ggtgaaatcttagcagatggcccttcaacagatttaggtgaattagcattaggtcaaaac
attcgtgtggcattcatgccttggaatggttataacttcgaagactcaatgttagtctct
gagcgtgttgtacaagaagatcgtttcactactattcatattcaagaattatcttgtgtg
gcgcgtgatactaaacttggtgcggaagaaatcactgcagatattccaaacgtcggtgaa
tcagcattaagtaaattagatgagtctggtatcgtttatatcggtgcggaagtgaaaggt
ggcgatatcctagtgggtaaagttacccctaaaggtgaaacacaattaacaccagaagaa
aaattacttcgtgcaatctttggtgaaaaagcgtctgacgttaaagattcttctttacgt
gtaccaaatggtacatcaggtacgattatcgacgttcaagtcttcactcgtgacggcgta
gaaaaagataaacgtgcgaaagaaatcgaagaaatgcaacttcgtgatgcgaagaaagac
cttgttgaagagttagaaatcttagaagcaggcttattcacacgtgttcgtaacctatta
atcgaaggtggtgttgctgaatcaacattagataacttacctcgtgaaaaatggttagag
caaactttagatgacgaagctaaacaaaatcaattagagcaacttgcggaacaacacgaa
gaattacgtaaagaatttgaacgtaaacttgaagttaaacgcaataagatcatccaaggc
gatgaccttgcaccaggcgtattaaaagttgttaaagtatatcttgctgtgaaacgtcaa
atccaaccgggtgataaaatggcgggacgtcacggtaacaaaggggttatctcaaaaatc
aacccagttgaagatatgccatacgatgaaaacggtcagccagttgagatcgtattgaat
ccactaggggttccatctcgtatgaacatcggtcagatcttagaaactcacttaggctta
gcagctcgtggtatcggtgatcaaatcaaccagatgatcaaacaacaacaatctatcgct
aaattacgtgaatatatccaaaaagcgtatgacttaggccacggtgctcaaagtgtagat
ttaaatacattctctgatgaagaagtattacgtttagcagaaaacctccgtaaaggttta
ccacttgctacacctgtatttgatggtgctcacgaagatgaaatcaaaggattattagaa
ttaggtggtttaccaacttctggtcaaattacgttatatgatggtcgtacaggtgaaaaa
ttcgagcgtccagtaaccgttggttatatgtatatgctcaaattgaaccacttggttgat
gacaaaatgcacgctcgttcaactggttcttatagtcttgttacacaacaaccattgggt
ggtaaagctcaattcggtggtcagcgtttcggtgagatggaggtatgggcattagaagca
tacggtgcggcttatactctacaagaaatgctaactgtgaaatctgatgacgtgaacggt
cgtactaagatgtataaaaatatcgtcgatggtacacactatatggaaccgggtatgcct
gaatctttcaacgttattacgaaagaaattcgtgcattaggtatcgatatggagttggac
gaagcataa
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