Orcinus orca (killer whale): 101271682
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Entry
101271682 CDS
T05247
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X4
KO
K15623
protein SSXT
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03082
ATP-dependent chromatin remodeling
oor05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101271682 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101271682 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101271682 (SS18)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101271682 (SS18)
GBAF(ncBAF) complex
101271682 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
101271682
NCBI-ProteinID:
XP_004273784
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Position
15:47496278..47572677
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVAGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYSHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNIQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMAQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPAQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcggccccgaggcagcgcggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgctgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaacatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tcacacaacatgccttcagatggaatggtagctgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaatatgccttcaagtagccacgggtccatg
ggaggttacagccattccgtgccatcgtcccagagcatgccggtacagaaccagatgacc
atgagtcaagggcagccaatgggaaactatggccccagaccaaatatgaatattcaacca
aaccaaggtccaatgatgcaccagcagcctccttctcaacagtacaatatgccgcaggga
ggtgggcagcattaccaaggccagcagccacctatgggaatgatgggtcaagttaaccag
ggcaatcatatgatggcacagagacagattcctccctatagaccaccacaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggagggaattcacagtatggccaacagcaagatgcttaccaaggaccacct
ccccaacagggatatccagcccagcagcagcagtacccagggcagcagggctacccagga
cagcagcagggctacggtccttcgcagggtggtccaggtcctcagtaccctaactacccg
caggggcaagggcagcagtatggaggttacagaccagcccagcctgggccaccccagccc
ccgcagcagaggccttacgggtatgaccagggacagtatggaaattaccagcagtga
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