KEGG   Orcinus orca (killer whale): 101271682
Entry
101271682         CDS       T05247                                 
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X4
  KO
K15623  protein SSXT
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03082  ATP-dependent chromatin remodeling
oor05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101271682 (SS18)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    101271682 (SS18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oor03036]
    101271682 (SS18)
Chromosome and associated proteins [BR:oor03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    101271682 (SS18)
   GBAF(ncBAF) complex
    101271682 (SS18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 101271682
NCBI-ProteinID: XP_004273784
LinkDB
Position
15:47496278..47572677
AA seq 418 aa
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVAGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYSHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNIQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMAQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPAQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtccgtggcgttcgcggccccgaggcagcgcggcaagggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgctgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaacatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacctccacgc
tcacacaacatgccttcagatggaatggtagctgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaatatgccttcaagtagccacgggtccatg
ggaggttacagccattccgtgccatcgtcccagagcatgccggtacagaaccagatgacc
atgagtcaagggcagccaatgggaaactatggccccagaccaaatatgaatattcaacca
aaccaaggtccaatgatgcaccagcagcctccttctcaacagtacaatatgccgcaggga
ggtgggcagcattaccaaggccagcagccacctatgggaatgatgggtcaagttaaccag
ggcaatcatatgatggcacagagacagattcctccctatagaccaccacaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggagggaattcacagtatggccaacagcaagatgcttaccaaggaccacct
ccccaacagggatatccagcccagcagcagcagtacccagggcagcagggctacccagga
cagcagcagggctacggtccttcgcagggtggtccaggtcctcagtaccctaactacccg
caggggcaagggcagcagtatggaggttacagaccagcccagcctgggccaccccagccc
ccgcagcagaggccttacgggtatgaccagggacagtatggaaattaccagcagtga

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