Orcinus orca (killer whale): 101274459
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Entry
101274459 CDS
T05247
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X2
KO
K12200
programmed cell death 6-interacting protein
Organism
oor
Orcinus orca (killer whale)
Pathway
oor03250
Viral life cycle - HIV-1
oor04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101274459 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101274459 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oor04131
]
101274459 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oor04147
]
101274459 (PDCD6IP)
Membrane trafficking [BR:
oor04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
101274459 (PDCD6IP)
Exosome [BR:
oor04147
]
Exosomal proteins
Proteins found in most exosomes
101274459 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
Ly49
Motif
Other DBs
NCBI-GeneID:
101274459
NCBI-ProteinID:
XP_004279758
LinkDB
All DBs
Position
10:complement(50874384..50935497)
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AA seq
871 aa
AA seq
DB search
MATFVSVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAALGRPLDK
HESALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKE
VFPVLAAKHCIMQAYAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNVKEF
SDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVSVPISQKFTDLFEKMVP
VSVQQSLAACGQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDISGDTVPQSILTK
STSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEETTDNDLRAKFKERWQRTP
SNELYKPLRAEGSNFRTVLDKAVQADGQVKERYQAHRDTIALLCKPELELNAAIPSANPA
KTMQGSEVVNVLKSLLTNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEAIS
VTELDRIYGGLTTKVQESLKKQEELLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATAY
DNFVELVANLKEGTKFYNELTEILIRFQNKCSDIVFARKTERDELLKDLQQSIAREPSAP
SIPTPAYQSSPAGGHTPMAPTPAPRTMPPTKPQPPARPPPPVLPANRTPATAPAPAPAPA
STGTTAPAPSQTPGSAPPLQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYPPVY
HQSPGQAPYPGPQQPSYPFPQPPQQPYYPQQ
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttcgtctcagtgcagctgaagaagacctcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgagcggcggggaggagcaggcccagtactgc
cgcgcggcggaggagctcagcaagctgcgccgcgccgcgctcggccgcccgctggacaag
cacgagagcgcgctcgagacgctgctgagatactatgatcagatctgttccattgaaccc
aaattcccattttctgaaaaccagatctgcttgacatttacctggaaggatgcttttgat
aaaggttcactttttggaggatctgtaaaattggctcttgcaagcctaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccagattgcagcggaacagaacctg
gataatgatgaaggattgaaaatcgctgctaagcattatcagtttgctagtggtgccttt
ttgcatattaaagagacggttttatctgccttgaatagagagcctactgtggacatatct
ccagatactgttgggactctcagtcttatcatgctggcacaggcccaagaagtatttttt
ttaaaagccacaagagataaaatgaaagatgctatcatagctaaattggctaatcaggct
gcagattatttcggtgatgcttttaaacagtgtcagtacaaagatactctccccaaggag
gtgttccctgtcttggctgcaaagcactgtatcatgcaggcctatgctgagtaccaccag
tctatcctggcaaaacagcagaagaaatttggagaagagattgcaaggttacagcatgcg
gcagaattgattaaaacagtggcatctcgctatgatgaatatgtcaatgtgaaggaattt
tctgacaaaatcaaccgtgcccttactgcagcaaagaaggataatgacttcatttatcat
gatcgagttccagaccttaaagatctagaccctattggcaaagccacacttgtgaaatct
acgccagtcagtgtacccatcagccagaaattcactgatctgtttgagaagatggttcct
gtgtcagtgcagcagtctttggctgcctgtggtcagaggaaagctgatttagttaacaga
tcaattgctcaaatgagagaagccaccactttggcaaatggggtgttagcttcacttaat
cttccagcagcaattgaagatatatctggagatactgtacctcagtctatactgactaag
tccacatctgtgattgaacagggaggcatccagactgttgatcagttgatcaaagagcta
cctgaacttctacaaagaaatagagaaatcctagatgagtcattaagactgttggatgaa
gaagaaacaactgacaatgatttaagagcaaaattcaaggaacgctggcaaaggacgcca
tccaatgaactctataagcccttaagagcagagggaagcaacttcagaactgttttggat
aaagctgtgcaagcagatggacaggtgaaagagcgttaccaggctcaccgggacaccatt
gcacttctgtgtaagccggagctggagctgaatgctgccatcccgtctgctaacccagcg
aagaccatgcagggcagcgaggttgtaaatgtcttaaaatccttactgacaaatcttgat
gaagtaaagaaggaaagagaggggctggagaatgacctgaaatcagtgaattttgacatg
acgagcaaatttttgactgctctggctcaagatggtgtgataaatgaagaagctatttct
gttactgaactggatcgaatctatgggggtcttacaactaaagtccaagaatctctaaag
aaacaagaagaacttcttaaaaatattcaggtctcacaccaggaattttcaaaaatgaaa
cagtctaacaatgaagctaatttaagagaagaagttttgaagaatttagccactgcgtat
gacaactttgttgaacttgtagctaatttgaaggagggcacaaagttttacaatgagctg
actgaaatactcatcaggttccagaacaaatgcagtgatatagtgtttgcacggaagaca
gagagggatgaactcttaaaggacttgcaacaaagcattgccagagaacctagtgctcct
tcaattcctacacctgcgtatcagtcctctcccgcagggggacacacgccaatggctcca
actccagcgccgagaaccatgccgcctactaagccccagcccccagcccggcctccacct
cctgtgcttccagcaaatcgaactcctgctactgctccagctccagctccagctccagcg
agcactgggaccactgcaccagctccatcacagactcctggttcagctccccctctgcag
gcccagggacctccataccccacctatccagggtatcccgggtattgccaaatgcccatg
cccatgggctataatccttacgcgtacggccagtataatatgccatatccgccagtgtat
caccagagccctggacaggctccgtacccaggaccccagcagccttcataccccttccct
cagcccccacagcagccttactatccacagcagtag
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