Orcinus orca (killer whale): 101279601
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Entry
101279601 CDS
T05247
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
oor
Orcinus orca (killer whale)
Brite
KEGG Orthology (KO) [BR:
oor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oor03036
]
101279601 (SMC4)
Chromosome and associated proteins [BR:
oor03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
101279601 (SMC4)
Condensin II
101279601 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
ATG17_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101279601
NCBI-ProteinID:
XP_004281901
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Position
5:45111487..45146184
Genome browser
AA seq
1288 aa
AA seq
DB search
MPRKGTQPSTARRREEGPPQSPDGASSDAEPEPPPGRAGSLAPATAETPSEEIDNRSLEE
ILNSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVVPN
SNFYVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGCGRLNEPIKVLCRRFEILNEHRGEKLNRVKMVEKEKDALEG
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSNILSN
EMKAKNKDVKDIEKKLNKITKFIEENKEKFTKLDLEDVQVREKLKHATSKARKLEKQLQK
DKEKVEEFKSIPAKSENIITETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKES
REKELMDFSKSVNEARSKMDVAQSELDIYLSRHNTAVSQLSKANEALMAASETLKERKAA
IGDIQAKLPQIEHELKEKEKQLQKLTQEEINFKSLVRDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKR
QNIGVATFIGLDKMAVWAKKMTKIQTPENTPRLFDLVKVKDEEIRQAFYFALRDTLVADN
LDQATRVAYRKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEIPEEEVNKME
SQLQRDSQKAVQIQEQKVQLEEAVVKLRHSEREMRNTLEKFTASIQRLSEQEEYLNVQVK
ELEANVLATAPDQKKQKLLEENVTAFKTEYNNVAERAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVDDLTA
ELKSLEDKAAEVVKNANAAEESLPEIQKEHRNLLKELKVIQENEHALQKDALSIKLKLEQ
VDGHIGEHNSKIKYWQKEISKISLHPIEDNPVEEIPLLSPEDLEAIKNPDSITNQIALLE
AQCHEMKPNLGAIAEYKKKEELYLQRVAELDKITYERDNFRQAYEDLRKQRLNEFMAGFY
IITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtaaaggcacccagccctccaccgcccggcgcagagaggaagggccgccgcag
tccccggacggcgccagcagcgacgcggagcccgagccgcctcccggccgcgcggggagc
ctcgcgcctgccaccgcagagactccaagtgaggaaatagataatagaagtttagaagag
attttgaatagcatccctcctcccccacctccagcaatgaccaatgaagctggagctcct
cgtcttatgataactcatattgtaaaccagaacttcaagtcctatgctggggaaaaaatt
ctgggacctttccataagcgcttttcctgtattattgggccaaatggcagtggcaaatct
aatgttattgattctatgctttttgtgtttggctatcgagcacaaaaaataagatctaaa
aaactctcagttctaatacacaattctgatgaacacaaggatattcagagttgtactgta
gaagttcattttcaaaagataattgataaggaaggggatgattatgaagtagttcctaac
agtaacttttatgtatccagaacggcctacagagataatacgtctgtttatcacataagt
gggaagaagaaaacatttaaggatgttggaaatcttcttcgaagccatggaattgacttg
gaccataatagatttttaatcttacagggtgaagttgaacaaattgctatgatgaaacca
aaaggccagactgaacatgatgagggtatgcttgaatatttagaagatataattggttgt
ggacggctaaatgaacctattaaagtcttgtgtcggagatttgaaatattaaatgaacac
agaggagagaagttaaacagagttaagatggtggaaaaggaaaaggatgccttagaagga
gagaaaaacatagccattgaatttcttaccttggaaaatgaaatatttagaaaaaagaat
catgtttgtcaatattacatttatgatctgcagaaacgaattgctgaaatggagactcaa
aaggaaaaaattcatgaagataccaaagaaattaatgagaagagcaatatactgtcaaac
gaaatgaaagctaagaataaagatgtaaaagatatagagaagaagctgaacaaaattaca
aaatttattgaggagaacaaagaaaaatttacaaaactagatttagaagatgttcaagtt
agggaaaaattaaagcatgctacaagtaaagccagaaaactggaaaaacaacttcaaaaa
gataaagaaaaggttgaagaatttaaaagtatacctgccaagagtgagaatatcataact
gagacaacaactagaaataatgcccttgagaaagaaaaagaaaaagaagaaaaaaaatta
aaggaagttatggatagccttaaacaggaaacacaagggcttcagaaagaaaaagaaagt
cgagagaaagaacttatggatttcagcaaatcagtaaatgaagcacgttcaaagatggat
gtagcccaatcagaacttgatatctatctcagtcgtcataataccgcagtgtctcaatta
agtaaggccaatgaagctctaatggcagcttctgagactctcaaagaaaggaaagctgca
attggagatatacaggcaaaactccctcaaattgaacatgaactaaaggagaaagaaaaa
caacttcaaaaacttacacaagaagaaataaatttcaaaagtttggttcgtgatcttttc
caaaaagttgaagaagctaagagttccttagcaatgaatcgaagtagggggaaagtcctt
gatgcaataattcaagaaaaaaaatctggcagaattccaggaatatatggaagattgggg
gacttaggagcaattgatgaaaagtatgatattgctatttcatcctgttgtcatgcatta
gactacattgttgttgattctatcgatacggcccaagaatgtgtaaacttccttaaaaga
caaaatattggagttgcaacctttataggtttggataagatggcagtgtgggcaaagaaa
atgaccaaaattcaaactcctgaaaatactcctcgattatttgatttagtaaaagtaaaa
gatgaggaaattcgccaagctttttactttgccttacgggataccttagtagctgacaac
ttagatcaagccacaagagtagcatatcggaaagatagaagatggagagtggtaacatta
caggggcaaatcatagaacagtcaggtacaatgactggtggtggaagcaaagtaatgaaa
ggaaggatgggttcatcagttgttgttgaaatcccagaagaagaggtaaataaaatggaa
tcacagttgcagagagactctcaaaaagcagtgcaaattcaggaacagaaagtacaactg
gaagaagcagtagttaagttaaggcatagtgaacgagaaatgaggaatacactagaaaag
tttactgcaagcatccagcgtttatcagagcaagaagaatatttgaatgtccaagttaag
gaacttgaagctaatgtacttgctacagcccctgaccaaaaaaagcagaaattgctagaa
gaaaatgttactgctttcaagacagagtataacaatgtggctgagagagctggtaaagtg
gaagctgaggttaaaaggttacacaatattatcgtagaaattaataaccataaactcaag
gcccaacaagacaaacttgataaaataaacaaacagttagatgaatgtgcttctgctatt
actaaagcccaagtagcaatcaagactgctgacagaaatcttaaaaaagcacaagactct
gtctttcgcacagagaaagaaataaaagatactgagaaagaagtagatgacttaacagcg
gagctaaaaagtcttgaagacaaagcagcagaggtcgtaaagaatgcaaatgctgcagag
gagtccttaccagagatccagaaagaacatcgtaacctacttaaagaactaaaagtaatt
caggaaaatgaacatgctcttcaaaaagatgcacttagtattaagttgaaacttgaacaa
gtagatggtcatattggtgaacataattctaaaataaaatactggcaaaaagagatttca
aaaatatcattgcatcccatagaagataatcctgttgaagagattccacttctaagccca
gaagatcttgaagcaatcaagaacccagattccataacaaatcaaattgcactcttggaa
gcccagtgtcatgaaatgaaaccaaaccttggtgccattgcagagtataaaaagaaggaa
gaattatatttacagcgggtagcagaattggacaaaattacttatgaaagagataatttt
agacaggcatatgaagatcttcggaaacaaaggcttaatgaattcatggcaggtttttat
ataataacaaataaattaaaggaaaattaccaaatgcttactttgggaggtgatgctgag
ctggagcttgtagacagcttggatcctttctctgaaggaatcatgttcagtgtccgacca
cctaagaaaagttggaagaagatcttcaacctttcgggaggagagaaaacacttagttca
ttggctttagtatttgctcttcaccactacaaacccactcccctgtacttcatggatgag
attgatgcagcccttgatttcaaaaatgtttccattgttgcattttatatatatgaacaa
acaaaaaatgcccagttcataataatttctcttcgaaataatatgtttgagatttcagat
agacttattggaatttacaagacatacaatataacaaaaagtgttgcagtaaacccaaaa
gaaattgcatctaaaggactttgctaa
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