KEGG   Orcinus orca (killer whale): 101281942
Entry
101281942         CDS       T05247                                 
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
oor  Orcinus orca (killer whale)
Pathway
oor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oor00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101281942 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oor03019]
    101281942 (CSTF1)
Messenger RNA biogenesis [BR:oor03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     101281942 (CSTF1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta CSTF1_dimer Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Aladin Beta-prop_VPS8 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Ge1_WD40 Beta-prop_HPS5 VPS8_N PROPPIN Beta-prop_WDR75_2nd Frtz DUF7099
Other DBs
NCBI-GeneID: 101281942
NCBI-ProteinID: XP_004282345
LinkDB
Position
16:complement(7127350..7138579)
AA seq 431 aa
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacagaaccaaagtgggcttgaaggatcgccagcagctctacaagctgatcattagc
cagctgctctatgatggctacatcagcattgctaatggcctcatcaatgaaatcaagcct
cagtctgtgtgtgcgccctcggagcagctcctgcacctcatcaaactaggaatggaaaac
gatgatactgcagttcagtatgcaattggtcggtcagatacagttgcccctggcacagga
attgacctggagtttgatgcagatgtccagactatgtccccagaggcttcagagtatgaa
acatgctatgtcacatcccataaaggaccatgtcgtgtagctacctatagtagagatggg
cagttaatagctactggatctgctgacgcttccataaaaatacttgacacagaaagaatg
ttggccaaaagtgccatgccaatagaggtcatgatgaatgagactgcacagcagaacatg
gaaaaccacccagtgattcgaactctttacgaccacgtggatgaagtcacgtgtctcgct
ttccacccaacagaacagatccttgcctctggttcaagggactatactcttaaattattt
gattattccaaaccatctgcaaaaagagccttcaaatacattcaggaggctgaaatgtta
cgctccatctcttttcatccttctggagactttatacttgttggaactcagcatcctact
cttcggctttacgatatcaacacatttcagtgctttgtctcttgcaatcctcaagatcaa
cacactgatgccatatgttccgttaattacaatcctagtgccaatatgtatgtgactggc
agcaaggacggctgcatcaaattgtgggatggtgtttcaaatcgatgcatcaccactttt
gagaaagcacacgacggtgctgaagtttgttctgccattttttccaaaaattcaaaatac
attctgtcaagtggaaaagactctgtagctaaactttgggaaatatcaacaggacgaacc
ctggtgagatacacaggtgctggcttgagcggacggcaggtgcaccggacgcaggcagtt
ttcaaccacacggaggactatgtgctgctgcctgacgagaggaccatcagcctctgctgc
tgggactcgaggacggccgagcgccggaacctgctctcgctgggccacaacaacatcgtg
cgctgtatcgtgcactcgcccaccaaccccggcttcatgacctgtagcgacgacttcagg
gcgcgcttttggtaccggaggtcaaccacggactag

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