Oratosquilla oratoria (Japanese mantis shrimp): 143019648
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Entry
143019648 CDS
T11268
Symbol
sw
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain short wing isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot04145
Phagosome
oot04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
143019648 (sw)
09142 Cell motility
04814 Motor proteins
143019648 (sw)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oot03036
]
143019648 (sw)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oot04812
]
143019648 (sw)
Chromosome and associated proteins [BR:
oot03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
143019648 (sw)
Cytoskeleton proteins [BR:
oot04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
143019648 (sw)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Dynein_IC2
WD40
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML
WDR55
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_SPT8
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
143019648
NCBI-ProteinID:
XP_076031603
LinkDB
All DBs
Position
37:35810428..35891047
Genome browser
AA seq
741 aa
AA seq
DB search
MASGGGVNIMERLQQSTNEARQNFWRQEKERKLAKLKQLKEEREKRRKGHLSREAQEAAQ
RAASQPRDDQQDVDKMLSSLGVAPVSGIKLFEEPEVVESPQQQEVLSSMSSMSSEPGADQ
TGTPDKSLELNFQASPRMHSRRKPQLSVVSVQATNIPPRETVTYTKGVQTTASGDSHGYY
EDWWRPRKAHGFDYYGDGILAQIRSKYHTMHEYNLNPALEWDDEFTVLTYDEAEDEDNSL
TALDTPPIFGGGHNRHLPPGILPTGMPQVQDVTPALASEEKKKEEEPAKPPRELSDEEKQ
MLILTEEFHSFFDRSTRIVERALAEEHDIFVDYSHDHDDDQAGTENGGVKLSLNRFFFDE
RWSRNRSITCMDWSPQYPELLVASYNNNEDSPHDPDGVALVWNTKFKKDTPEYIFHCQSP
VMSATFARFHPNLIIGGTYSGQIVLWDNRSQKRTPVQRSPLSASAHTHPVYCMRVVGTQN
AHNLISVSTDGKMCSWSLDMLSQPQESMELQHKQSRAVAVTSLAFPHGDVNNFIVGSEEG
AVFTACRHGSKAGIVDVYEGHQGPVTGVATHATPGTIDFSHLFLTSSIDWTVKLWSMKHW
SLKETKPLYSFEDNGEYVYDVAWSPIHPALFTTVDGSGRIDLWNLNLDTEVPTASTFIEG
CPALNRVSWTNSGQQITVGDDVGKIWIYDVGEQLALPRADDWARLVHTLGELKNNQADEE
QSTRHYESSLSSLTSMSSSLR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggtggaggtgtcaatattatggaaagattgcaacagagcacaaatgaggct
agacaaaatttttggagacaagagaaggaaaggaaactggccaagttgaagcaactcaaa
gaagaacgagaaaagagaagaaagggtcatttatccagagaggctcaggaggctgcacag
cgtgcagctagccagccccgtgatgatcagcaggatgtggacaaaatgctctcctctttg
ggagtggcaccagtctcgggcataaaattatttgaagaaccagaagtggtggagagtcca
caacagcaggaggtgttgtcgagcatgtctagcatgtcttcagaacctggagccgatcag
actggaacacctgacaagagtttggaacttaatttccaggcttcacccaggatgcacagt
cgcaggaagccgcagctatcggttgtaagcgtgcaagctaccaacatccccccaagagag
actgtaacttataccaagggggttcagacaactgcttcaggggacagtcacggttactat
gaggactggtggcggccccgtaaagcccatggcttcgactattacggagatggaatctta
gctcaaattcgatctaaataccacactatgcacgaatataatctaaatccagcgcttgaa
tgggatgatgagttcacagttcttacgtatgatgaagcggaagatgaagacaattccttg
accgctctcgacaccccacccatctttggagggggacacaaccgtcacctgcccccagga
attctgccaactggcatgccacaggtccaggatgtcaccccagcccttgcttctgaggaa
aagaaaaaggaggaagaaccagccaagccacctcgagaattgtccgatgaagaaaaacaa
atgctgatactgacagaagaatttcatagtttctttgatcgctccacacgtattgttgaa
cgtgccttggctgaggaacatgacatctttgttgactactctcatgaccatgatgatgac
caagctggaacggaaaatggtggagtaaagctgtcactgaatcgattcttctttgatgaa
cgttggtcaagaaatcgtagcatcacatgtatggactggtcaccacagtatccagagtta
ttagttgcgagctacaacaataatgaagactcaccccatgaccctgatggcgtggcactg
gtgtggaatacgaaatttaagaaagacacacctgagtatattttccattgccagagccct
gtgatgtcggctacatttgcaagattccatcccaaccttattattggtggaacgtattca
ggccagattgtgctgtgggacaaccgaagccaaaagagaaccccagttcagcgtagtcct
ttgtcagcttcagcgcacacacatccagtgtattgtatgagagtggtgggtacccagaat
gcacacaatctcatcagtgtgagcacagatggaaagatgtgttcttggtctttagacatg
ctgtcacaaccacaggagtccatggagctacagcacaaacagtcacgtgcagttgcagtg
acgagcttagccttcccacatggagatgtcaacaacttcattgttggctctgaggaaggt
gcagtttttactgcttgtcggcatggaagcaaggcaggcattgtggatgtgtacgaaggt
caccaaggaccagtaactggtgtagcaactcatgctactcctggcactatcgacttctct
catctgttcctcacttcctccatcgactggactgtaaagttgtggtccatgaagcactgg
tcccttaaggagacaaagccattatattcattcgaggataatggtgagtatgtatatgat
gtggcatggtcaccgatacacccagctctcttcaccactgtggatggatctggacgaatt
gacctctggaatctcaatctcgatacagaggttcccacagccagcacattcatagaagga
tgcccagcccttaatagggtatcatggacaaactctggacaacaaattactgtaggagat
gatgttggcaaaatctggatttatgatgttggagaacaactggctctgccacgtgctgat
gactgggcacgactagtacacacccttggtgagctgaagaacaaccaagctgatgaagag
cagagcacaaggcactatgaatcctccctatcttcactaacatcaatgtcatcatctctc
agatag
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