Oratosquilla oratoria (Japanese mantis shrimp): 143041152
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Entry
143041152 CDS
T11268
Symbol
Polr1A
Name
(RefSeq) RNA polymerase I subunit RpI1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
oot Oratosquilla oratoria (Japanese mantis shrimp)
Pathway
oot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
143041152 (Polr1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oot03021
]
143041152 (Polr1A)
Enzymes [BR:
oot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
143041152 (Polr1A)
Transcription machinery [BR:
oot03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
143041152 (Polr1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
Motif
Other DBs
NCBI-GeneID:
143041152
NCBI-ProteinID:
XP_076069072
LinkDB
All DBs
Position
30:47009539..47046151
Genome browser
AA seq
1707 aa
AA seq
DB search
MGSRGRFPPTKVEELYFRMYSDKDIENISVMRVTSDVSFNELEHADPEGVYGLRMGPMSG
REIDLCKTCGLNSMRCMGHCGHIDLPLPVFNPNFYDILKQFLEKVCFHCHRFQAKAVNVL
QLIYEVRLARAGYGKEALEIGDITSRIINGSWDEAIEVSAGPGDGKDRLDINVLKALKRG
LEKYYKKVIKEGNSTRSSVTTASNSSVNAIYQQAVRRFFSNSSNVGKVKCCFCKAPMLRL
RVQNSRFLIVNRGRKKNEDDKEDEEVEESAIGNTQSYITPDQARSCLRNCWTKDKELLSH
LYPILACSDHEYPTDLFFMQKILVIPPKYRPCNFQDGMMVEHEMSTLLKNIVKYSKCLFF
LISVLNKTMEDIPEALTYILSEVPGKTNQEKMQNVWYQVQGNVDNILDAKLNNMVKITTK
GIKQVIEKKEGLFRNNLMGKRVNFSARSVAAPDPNLAVDEVGVPRDFAIRLTYPVPVTSW
NSEELRNLVLNGPAIYPGALIVEDEEGRKTLLKENDFNQRQGVAKKLLTPTESHVRKVHA
SKIVYRHLKDGDFVLMNRQPTLHRPSIQAHRARVMNKERVLRMPYANCKAYNADFDGDEL
NLHFPQNEMARSEAFHLVTTHNQYLTPKDGSPLAGLIQDCVVSSVMVTMRGTYFNKEDYQ
QLVFSGLVDQMSHIRTQAPSILKPLQLWSGKQVISTILQNIIPSNKAKPTFTFRTNVKHE
MWQKVAPREWRGGGTPEKRKESMTESEFIMRDGDLLCGVIDKCAIGSTSHGLIHTCYDLY
GGAVATGVLTAINRLCTYYLQWVGHTIGAKEFVTPKVVSSKRRKALNVLVETCAKEVAPK
LGVPLEKLQDHFEAAHVTNNEKEMAAIDAAYTSVLGPVTSQVTAENERGLYRRGLDNNMK
MMVDTGAKGSKVNMNQMASLFGSLAIDGKRMPQSITGKTLPSFKPYDINPRAGGYIPKRF
MTGIDPQSYFFLCIVGRDSLQHTAVKTASSGYVQRCLIKHLEGIQVMYDMTVRNSDGLVL
QFDFGEDGQDVSKVPFLKEPRALDILVDNYSRLLDPKALAATSSRGENEEAKKYKEKIKK
WQKKNKSNRGDRRSGFLHFCHKTSHKVEESNFCPKTGRSLKALKLEGMWRDLSEEEKLKH
AKKTGRCPDPVASKFSASSTLGVVSEALDDLIDNYYNNFYKKRTKSEQYLSKDQLRETIH
MKALTSRVDPGEAVGAICAQALGEPLTQMTLNTFHFAGKDELNVTLGVPRMIEILRTGTP
HISTPIMEVPFRSHISKAQAEAMKMKLSQVPLSKVLNRMDVTVSLELNQSKRLLRRVKVC
FHFLPQREYRHTYAVKPRQIIDYVYKHYISQVLLAGIKKAYGRSKPKLVDTGNEGKETEN
DSRDVVDDEEFGLSRKGAPQAKEEEANSESEDEVEDNEADAATAARQKRANEQDYSEDEE
EEEEKDQAMSEDEGLGEEKLESADEREEQEDGLSKPKVYSKNPLTENEVSKMKNYVLSLD
RWIVDFTLDAKNYSSCEVTLMLPTAQGKMDIATVVRKTTEKALVHHVSNIKRAFVVEKDN
GLLLRTEGVNVQKMFEYEHILDINRLYTNDIHMVAHMYGIEAAQRSIIREIQSVHSAYDI
KVDFRHLSLLADYFTCEGMYKACSRHHITSCISPIQKMSYETSTQFLKKAILSNESDHMC
SPSANIAVGQTVKVGTNIMHIMPILKL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgggtagccgaggccgctttcctcccaccaaagttgaagaactgtattttcgcatgtac
tctgacaaagatattgagaatatatctgttatgcgagtaaccagtgatgtatcattcaat
gaacttgagcatgccgatccagaaggagtatatggattacgaatgggaccaatgtctggc
agagaaattgacctctgcaagacatgtggactcaacagtatgcggtgtatgggccactgc
ggtcacattgatcttcctctacctgtgtttaatccaaatttctatgatatactgaaacaa
tttttggagaaagtttgcttccattgtcacagatttcaagccaaagctgtaaatgttcta
cagttgatatatgaggtgcgccttgcacgtgccggatatggcaaagaggcccttgagatc
ggtgacattacgtccaggattatcaatggctcttgggatgaagccattgaggtttctgct
ggaccaggggacggcaaggacagactggacataaatgtactgaaggctctaaaacgggga
ttagagaaatattataagaaagtgatcaaagaaggcaacagcaccagaagtagtgtgacc
acagcttcaaactcatctgtgaatgccatataccagcaagcagtgaggcgcttcttcagt
aattcatcaaatgtgggcaaggtgaaatgctgcttctgcaaagcgcccatgttacgtctt
cgtgtacaaaactcgaggtttttgatcgtcaacagaggaagaaagaagaatgaggatgac
aaggaggatgaggaagttgaagaaagtgcaattggaaacactcagtcttacattactcct
gatcaggcccgctcttgccttcgtaactgttggacgaaagacaaggaacttttgtcgcac
ttgtatcccatcctcgcttgctctgaccacgagtacccaacggacttattcttcatgcag
aagattctcgtcatcccccccaaataccgaccctgcaacttccaggacgggatgatggtc
gagcatgagatgagcactttgttaaagaatatcgtcaagtattccaagtgcctcttcttc
ctcatttcggtcctgaacaaaaccatggaggatatacccgaggctttgacgtacattttg
tccgaagtaccaggaaagaccaaccaggaaaagatgcagaacgtgtggtaccaagtgcag
ggtaatgtcgacaatatcttggacgccaagctcaataacatggtcaaaataaccaccaaa
ggtattaaacaggtaatcgaaaagaaggaagggcttttccgcaacaacctgatgggaaag
agagtcaacttctctgcacgatcagttgctgccccggatccaaatcttgccgtagatgaa
gtgggcgttccccgtgactttgccatccggctgacttaccctgttcctgtcacatcatgg
aattcggaagaattaaggaatttagtcctgaatggtcctgccatctaccctggtgctttg
attgtggaagacgaagagggacggaagactctcttgaaagaaaacgacttcaatcaacgc
caaggtgtggcaaagaaactcctgacccccacagagtctcatgttcgcaaggttcacgca
tcaaagatcgtctaccggcacttaaaggatggcgactttgtcctcatgaaccgacaaccc
actctacatagaccgagtatacaagcacatcgggccagggtgatgaacaaggaacgtgta
ctcaggatgccgtatgcaaactgcaaggcttacaatgccgactttgacggcgatgaactg
aacttgcacttcccccagaacgagatggcgcgaagcgaagccttccaccttgtcaccaca
cacaaccaatacctcactccaaaagacggttcacctctagcaggcttgattcaagactgc
gtcgtatccagcgtgatggtgaccatgcgaggaacttatttcaataaagaagattaccaa
cagcttgtgttctcgggcttggtggaccagatgagccacatccgaacgcaggccccctcg
attttgaagccgctgcagctgtggtcgggcaaacaggtgatatccaccatcctacagaac
atcatcccatcgaacaaggccaaaccaacatttacatttaggacaaatgtgaaacatgag
atgtggcagaaagtggcaccgagggaatggcgaggcggaggaactccggagaagaggaag
gaatccatgacagaatccgagttcatcatgcgtgatggggacctgctctgcggagttatt
gacaagtgtgccattggatctactagccatgggctcatccacacctgctatgatctttat
ggcggggctgtggccacaggggtgttgacggccatcaaccgcctctgcacgtactacctc
cagtgggttggccacacgattggggccaaggagtttgtcacaccaaaggtggtcagcagt
aagcgtcggaaagcacttaatgttcttgtggaaacatgtgccaaggaagttgccccaaag
cttggagtccccctagagaagttgcaggaccactttgaggcggcgcatgtcaccaataac
gaaaaggaaatggcagccattgatgcggcatacacctctgtcttgggtccagttacgtca
caggttacagccgaaaatgaacgaggattataccgaagaggcttggacaacaacatgaag
atgatggtcgacacaggtgctaaaggatccaaggtcaacatgaaccagatggcatctctc
ttcggttccttggccatagatggtaaacgtatgccacaaagtattacaggcaagacactt
ccgtccttcaagccatatgatatcaacccgagagctggaggatacatcccgaagaggttc
atgacaggaatagatcctcagtcatacttcttcctttgcattgtaggacgtgatagtttg
caacacactgccgtgaagacggcaagtagtggttacgttcagcggtgtctcatcaagcac
ttggagggcatccaggtcatgtacgacatgactgtccggaacagtgacggtcttgtgctc
cagtttgattttggagaggatggccaggatgtgagcaaagttcccttcttgaaggaaccc
agggccctcgacatcctagtggacaattactcccggctcctggaccccaaggctctcgct
gcgacttcctccaggggcgagaatgaggaggccaagaagtacaaagaaaagataaagaag
tggcagaagaagaacaaatcaaacagaggagatcgacggagcgggttcttgcacttctgc
cacaagacgagtcataaggtggaggagtccaacttctgccccaagacggggaggtccctc
aaggccctgaagctggaaggaatgtggcgagatctgtccgaggaagagaagctcaaacac
gcaaagaaaacaggaaggtgtccagatccagtcgcatcaaaattcagtgcttcctccaca
cttggggtcgtatctgaagcattggacgacctgatagacaactattacaacaatttttat
aaaaagcgtacaaagagcgaacagtatttgagcaaggaccagctacgtgagacgatccac
atgaaggccctgacgtccagggtcgacccgggagaggcagttggagccatctgtgctcag
gccttgggagaacccttgactcagatgacactcaacactttccattttgctggaaaggat
gaactaaatgtaactttaggtgtaccacgcatgattgagatattgcgcactgggacgccc
catatatccacaccaatcatggaggttcctttccgctcccatatcagcaaagcacaagca
gaagccatgaaaatgaagctgtctcaggttcccctctcaaaggttctcaatcgcatggat
gtgacagtaagccttgaactgaaccaatcaaagcgtctccttcgtcgggtgaaagtctgt
ttccacttcctcccacaacgagagtatcgccacacatatgccgtcaaaccacgtcagatt
atcgattatgtgtacaagcattacatcagtcaggttctgcttgcaggaataaagaaggcg
tatggccgaagtaaaccaaagctggtggacacgggaaatgaaggaaaggagactgagaat
gactcgagagatgttgttgacgacgaagaatttggtctgagcaggaaaggggcacctcag
gccaaagaagaggaggcgaactcagagtctgaagatgaagttgaagacaacgaagctgat
gcagcaactgcagccagacagaaaagggcaaacgagcaagattattccgaggatgaagag
gaggaggaggagaaggaccaagccatgtcggaggacgaaggcctcggagaagaaaaactg
gaaagtgctgacgaaagagaagaacaagaggatgggctttcaaaacccaaagtgtattcg
aaaaatccgctgacagaaaacgaagtctcaaagatgaagaattatgtacttagtttggat
cgctggattgtagatttcacgctggatgcgaagaactattcttcctgtgaagtcaccttg
atgcttccaaccgcacaggggaaaatggacattgcaactgtggtgcggaagaccacagag
aaggcgctcgtccaccatgtttccaacattaagagagcatttgtggtagagaaagataat
gggctgctactcagaactgaaggagtcaatgttcaaaaaatgttcgaatatgagcacatc
cttgacataaaccgtctgtatacgaatgacatccacatggtcgcccacatgtatggtatc
gaagctgcccagcgttccatcatcagggaaattcagtcggtacactctgcttatgatatc
aaggtggactttcgccatttgagtctcctggccgactacttcacgtgtgagggcatgtac
aaggcgtgttcgcggcaccatatcacctcctgcatctcgcccattcagaaaatgtcctac
gaaacaagtacacagttcttgaaaaaggctattctgagcaatgaatcagaccacatgtgt
tcaccgtcggcaaatattgctgttggacaaactgtgaaagtggggaccaacattatgcac
atcatgcccatcttgaagctctga
DBGET
integrated database retrieval system
