Ochotona princeps (American pika): 101520822
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Entry
101520822 CDS
T07609
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type substrate 1-like
KO
K06551
signal-regulatory protein alpha/beta1/gamma
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04148
Efferocytosis
opi04380
Osteoclast differentiation
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101520822
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
101520822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101520822
04090 CD molecules [BR:
opi04090
]
101520822
Cell adhesion molecules [BR:
opi04515
]
Immunoglobulin superfamily
SIRP family
101520822
CD molecules [BR:
opi04090
]
Proteins
101520822
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
C1-set
ig
Ig_2
C2-set_2
I-set
Motif
Other DBs
NCBI-GeneID:
101520822
NCBI-ProteinID:
XP_012782589
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Position
4A:18201776..18254531
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AA seq
523 aa
AA seq
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MPAPASQPHHPHPFLLLTLLLELTGAAEEELQVTQPDKSVLVAAGDSVTLHCSVNTLLPV
GPTKWFRGAGPGRKMIYDFKGGQYPRVTNLSDATKRQNLDFSIRISDITMADTGTYYCVK
FQRVGTRDVEFKSGPGTQVSVRGAAEEELQVTQPDKSVSVAAGDSVTLHCSVNTLLPVGP
VYWFRGAGPDRKMIYDFKGGQYPRVTNLSDVTKRQNMDFSIRISDITTADTGTYYCMKFR
REGAGDMEFKSGPGIQLSVQAKPSNPEVSGPVTRAAPEQTVSFTCKSHGFSPRNISLRWF
KNRNELSAFQTSVEPAGESVSYNISSTAQVVLSSGDVHSEVICEVAHVTLQGGPPLRGTI
YLSDTIRVPPRVEVTQQPVGAGTQVNVTCHVDKFYPRSMRLTWLENGKVSHTEMAWTSVK
NKDGTYNRTSWILVNNSAHREDLVLSCRVEHDRQPAVIRSHTLQVSAQPKEPDSNTNISD
DCEQQDSSGFFMAVSNAGASCSTARLSRQRALSGGDSHTEDFA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccctgcctcccagccccaccatcctcatcctttcctgctgctgactctgctg
ctggaactgacaggggcagcagaggaggagctgcaggtgactcagcctgacaagtccgtg
ttggtggcagctggagactcggtgaccctgcactgcagtgtaaacaccctgctccctgtg
gggcccacaaagtggttcaggggggctgggccaggccggaagatgatctatgacttcaag
ggaggccagtacccccgagtcacaaacctctcagatgccacaaagcgacagaacctggac
ttttccatccgcatcagtgacatcaccatggcagacacaggcacctactactgtgtgaag
ttccagagagtgggtactagagatgtggagtttaagtctggaccgggcacacaggtgtct
gtgcgaggggcagcagaggaggagctgcaggtgactcagcctgacaagtccgtgtcggtg
gcagctggagactcggtgaccctgcactgcagcgtaaacaccctgctgcccgttggaccc
gtatactggttcagaggggctgggccagaccggaagatgatctatgacttcaagggaggc
cagtacccccgagtcacaaacctctcagatgtcacaaagcgacagaacatggacttttcc
atccgcatcagtgacatcaccacagcagacaccggcacctactactgcatgaagttccgg
agagagggtgcaggagacatggagtttaagtctggaccgggcatacagttgtctgtgcaa
gccaaaccctccaaccctgaggtgtctggccctgtgaccagggcagcccctgagcagact
gtaagcttcacctgcaagtcccatggcttctcaccccgcaacatcagcctgagatggttc
aagaacagaaacgagctctcggccttccagaccagcgtggagcccgcaggagagagcgtc
tcctacaacatctccagcactgcccaggtggtcctgtcatctggggacgtgcactctgag
gtcatctgtgaggtggcccatgtcacacttcaggggggccctcctcttcgtgggactatc
tatttgtctgacaccatccgagttccccccagggtggaggtcacacagcagcccgtgggg
gcagggacccaggtgaacgtcacctgccacgtggacaagttttaccccaggagcatgcgg
ctgacgtggctggagaatggaaaagtgtcccacacagagatggcctggacgtcagtgaag
aacaaggacgggacctacaaccgcacaagctggatcctggtgaacaactccgcccacagg
gaggacctggtgctctcctgccgggtggaacatgataggcagccagcagtcatcagaagc
cacaccctgcaggtgtcagcccagcccaaggagcccgactcaaacaccaacatcagtgat
gactgtgagcaacaagatagcagcggctttttcatggctgtcagtaacgctggagcaagc
tgcagtaccgcgcgcctcagccgccagagggcgctaagcggcggcgattcccacacggag
gactttgcgtga
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