Ochotona princeps (American pika): 101521459
Help
Entry
101521459 CDS
T07609
Symbol
HMGCS2
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, mitochondrial
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00280
Valine, leucine and isoleucine degradation
opi00650
Butanoate metabolism
opi00900
Terpenoid backbone biosynthesis
opi01100
Metabolic pathways
opi03320
PPAR signaling pathway
Module
opi_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
101521459 (HMGCS2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101521459 (HMGCS2)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
101521459 (HMGCS2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
101521459 (HMGCS2)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
101521459 (HMGCS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
101521459
NCBI-ProteinID:
XP_004581911
LinkDB
All DBs
Position
13:complement(107082565..107102611)
Genome browser
AA seq
508 aa
AA seq
DB search
MQRLAAPLRQVLQVKRALREASLTPARLLPATQQRFSTVSPAPLAKTATWPKDVGILALE
VYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTQMGFCSVQEDINSLCLTVVQRLMERTQVP
WDSVGRLEVGTETIIDKSKAVKTVLMELFKDSGNTDIEGIDTTNACYGGTASLFNAANWM
ESSYWDGRYALVVCGDIAVYPDGNARPTGGAGAVAMLIGPHAPLALEQGLRGTHMENAYD
FYKPNLASEYPLVDGKLSIQCYFRALDRCYTAYRQKIQKQWKQDGIDRPFTLNDFQYMIF
HTPFCKLVQKSLARLVFNDFLSASDDTQASLYKGLEAFKGLKLEDTYTNKEVDKAILKAS
LDTYNKKTKASLYLSTHNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASL
FSLRVSQDASPGSPLDKLVSSVSDLPKRLASRKKMSPEQFTEIMNEREHFYHKVNFSPPG
DTKNLFPGTWYLERVDELHRRKYARRPV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtctggcggctcctctgaggcaggtactgcaagtcaaaagagccctgcgggaa
gcctccctcacacctgctcgcctgctcccggcaacccagcaaaggttttccacagtttct
cctgccccactggccaaaacagccacttggccaaaggatgtaggcatcctagccctggag
gtctacttccccgcccagtatgtggaccaaacggacctggagaagttcaacaatgtagaa
gcaggaaagtatacagtgggcttgggtcagacccagatgggcttctgctcagtccaggag
gacatcaattccctgtgcctgacagtggtgcaacggctgatggagcgcacacaggtccca
tgggactctgtgggccggctggaagtgggcactgagaccatcattgacaagtccaaggct
gtcaaaacagtgctcatggaactcttcaaggactcaggcaacacggacatcgaaggcata
gacaccaccaatgcctgctatggtggcacggcctcccttttcaacgccgccaactggatg
gagtccagctactgggatggtcgctacgcactggtggtctgtggggacattgcagtctat
cctgatgggaatgcccgacctacaggtggggctggagctgtggcaatgctgattggaccc
catgcccctctggccctggagcaagggcttcggggaacccacatggagaatgcatatgac
ttctataagccaaacctggcctcggagtacccactggtagatgggaaactctccattcaa
tgctactttcgggctttggatcgatgttacacagcataccgccaaaaaatccagaagcag
tggaagcaagatggcatcgacaggccgttcaccctcaacgacttccagtacatgatcttt
cacacccccttttgtaagctggtccagaagtctctggctcgcctggtgttcaacgacttc
ctgtcagccagtgatgacacccaagccagcttatacaaggggctggaggccttcaaggga
ctgaagttggaagacacctacaccaacaaggaagtggacaaagcaatcctgaaggcttct
ctggacacatacaacaagaagaccaaggcctcgctgtacctctccacacacaacgggaac
atgtacacctcgtccctgtatgggtgcctggcctcacttctgtcccatcactctgctcag
gagctggctggctcccggattggtgccttttcctacggctcgggcttagcagcaagcctt
ttctcacttcgagtgtcccaggatgcttctccaggctcccctctggataagctggtatct
agtgtgtcagacttgccgaaacgcctggcctcccggaagaaaatgtctcctgagcagttc
acagaaatcatgaacgaaagggagcatttctaccacaaagtgaatttctcaccacctggt
gacacgaagaacctcttcccaggcacttggtacctggagcgagtggatgaactccatcgc
cggaagtatgccaggcgtcccgtttaa
DBGET
integrated database retrieval system
