KEGG   Ochotona princeps (American pika): 101521734
Entry
101521734         CDS       T07609                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101521734 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:opi03041]
    101521734 (SF3A1)
Spliceosome [BR:opi03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101521734 (SF3A1)
 Complex B
    101521734 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    101521734 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 101521734
NCBI-ProteinID: XP_004592037
LinkDB
Position
21:complement(17544494..17563604)
AA seq 793 aa
MPAGPVQAVPPPPPVVPEPKQPPEEDASSKEDSTPAKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTEETPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPDTPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNEIPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPTSKKLKTEDSLMPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAI
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccgggccggtgcaggcggtccctccgccgccgcccgtggtcccggagcccaaa
cagcctccagaagaagatgcgtcttcaaaggaggattccaccccggccaagccggtggtg
gggatcatctaccctccgccagaggtcaggaatatcgtcgacaagaccgccagcttcgtg
gccagaaacggacctgaatttgaagctaggatccgacaaaacgaaatcaacaaccccaag
ttcaacttcctgaaccccaatgacccttaccatgcctactaccgccacaaggtcagcgag
ttcaaggaggggaaggcccaggagccctcggccgctatccccaaggttatgcagcagcag
cagcaggccacccagcagcagctgcctcagaaggtccaggcccaggtgattcaggagacc
gtcgtgcccaaagaaccccctccagagtttgagttcatcgcagatcctccttccatctct
gctttcgacctggatgtagtgaagctcacagcccagtttgtggccaggaatgggcgccag
tttctgacccagctgatgcagaaggagcagcgcaactaccagtttgactttctccgccca
cagcacagcctcttcaattacttcacaaagctggtggagcagtacaccaagattttgatt
ccacccaaaggtttatttacgaagctcaagaaagaggctgaaaatccacgagaggtgttg
gatcaggtgtgctaccgggtggagtgggccaagttccaggagcgtgagaggaagaaggag
gaggaggagaaggagaaggagcgggtggcctatgcacagattgactggcatgactttgtc
gtggtggagactgttgactttcaacccaatgagcaagggaacttccctcccccaaccaca
ccggaggagctgggtgcccggattctcatccaggagcggtatgagaagtttggggaaagt
gaggaggtggagatggaagtcgagtcagacgaggaggatgagaaacaggagaagacagag
gagacgccttcccagctggaccaggacacccaagtgcaagacatggatgagggttcagat
gatgaagaagaagggcagaaggtgcccccacccccagatacgcccatgcctccgcctctg
cccccaaccccagaccaagtcattgtccgcaaagactacgatcctaaagcgtccaagccc
ctgcctcctgctcctgctccggatgaatacctcgtgtctcccatcacgggggagaagatc
cctgccagcaagatgcaggagcacatgcgcatcgggctcctggacccccgctggctggag
cagcgggatcgctccatccgcgagaagcagagcgatgatgaagtgtatgcaccaggtctg
gatattgagagcagcctgaaacagctggccgagcggcgtaccgacatcttcggtgtggag
gaaacggccattggtaagaagatcggagaggaggagatccagaagccagaggaaaaggtg
acatgggatggccactcaggcagcatggctcgaactcagcaggctgctcaggccaacatc
accctccaagaacagattgaggccatccacaaggccaagggcctggtgcccgaagatgac
accaaagagaagattggccccagcaagcccaatgaaatcccccagcagccaccccctccg
tcttcagccaccaacatccccagttcagccccacccatcacctcagtgccccgaccacct
gcgatgccacctcctgttcgcactactgttgtgtccgcagtgcctgtcatgccccggccc
ccaatggcatctgtggttcggctacccccaggttcagtgatcgcccccatgccacctatc
atccacgcacccaggatcaatgtggtgcccatgcctccctcagcacctccgatcatggca
ccccggccaccacccatgattgtgccaacagcttttgtgcccgctccacctgtggcaccc
gtcccagctccagccccaatgccccctgtgcaccccccacctcctatggaagatgagccc
acctccaagaaactgaaaacagaggacagcctcatgcccgaggaggagttcctgcgcagg
aacaagggtccagtgtccatcaaagtccaggtgcccaacatgcaggataagacggaatgg
aagctgaatgggcaggtgctggtcttcacccttcctctcacagaccaggtctctgtcatc
aaggtgaagattcacgaagctacgggcatgcctgcagggaaacagaagctacagtatgag
ggcatcttcatcaaggattccaactcgctggcgtactacaacatggccaatggcgccatc
atccatctggccctcaaggagagaggtggcaggaagaagtag

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